RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ATG9AQ7Z3C6 839 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 ZNF396Q96N95 335 aaPredicted RBP16.69■□□□□ 0.26
CDH1-209ENST00000566510 ZBTB3Q9H5J0 574 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 LAMA4Q16363 1823 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 RFX7Q2KHR2 1363 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 CASP7P55210 303 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 STX1AQ16623 288 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 RCOR1Q9UKL0 485 aa16.69■□□□□ 0.26
CDH1-209ENST00000566510 HAND2P61296 217 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
CDH1-209ENST00000566510 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
CDH1-209ENST00000566510 CAMTA1Q9Y6Y1 1673 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 CAVIN2O95810 425 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 EXOSC10Q01780 885 aaKnown RBP16.68■□□□□ 0.26
CDH1-209ENST00000566510 GORABQ5T7V8 394 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 FILIP1Q7Z7B0 1213 aa16.68■□□□□ 0.26
CDH1-209ENST00000566510 ADAMTS7Q9UKP4 1686 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 A0A1B0GUL7 405 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 CTAGE5O15320 804 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 PDIA3P30101 505 aaKnown RBP16.67■□□□□ 0.26
CDH1-209ENST00000566510 ARID5BQ14865 1188 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 IQCB1Q15051 598 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 ZMYM1Q5SVZ6 1142 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDH1-209ENST00000566510 ARFGEF2Q9Y6D5 1785 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 A1BGP04217 495 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 IL15P40933 162 aaPredicted RBP16.67■□□□□ 0.26
CDH1-209ENST00000566510 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
CDH1-209ENST00000566510 SDF4Q9BRK5 362 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 GPHNQ9NQX3 736 aaPredicted RBP16.67■□□□□ 0.26
CDH1-209ENST00000566510 MAST3O60307 1309 aa16.67■□□□□ 0.26
CDH1-209ENST00000566510 NBPF26B4DH59 902 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 H7C1W4 665 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 RNF113AO15541 343 aaKnown RBP16.66■□□□□ 0.26
CDH1-209ENST00000566510 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
CDH1-209ENST00000566510 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
CDH1-209ENST00000566510 NBPF14Q5TI25 921 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 NBPF10Q6P3W6 841 aaKnown RBP16.66■□□□□ 0.26
CDH1-209ENST00000566510 RAB11FIP4Q86YS3 637 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 NBPF15Q8N660 670 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
CDH1-209ENST00000566510 FAM160A1Q05DH4 1040 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 PUS3Q9BZE2 481 aaKnown RBP16.66■□□□□ 0.26
CDH1-209ENST00000566510 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
CDH1-209ENST00000566510 M0R2C6 588 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 ZRSR1Q15695 479 aaKnown RBP16.65■□□□□ 0.26
CDH1-209ENST00000566510 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
CDH1-209ENST00000566510 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 A0A1B0GVL5 298 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 ATF3P18847 181 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 ATP2B3Q16720 1220 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
CDH1-209ENST00000566510 EYA2O00167 538 aa16.64■□□□□ 0.26
CDH1-209ENST00000566510 SMAP1Q8IYB5 467 aaPredicted RBP16.64■□□□□ 0.26
CDH1-209ENST00000566510 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
CDH1-209ENST00000566510 AOPEPQ8N6M6 819 aa16.64■□□□□ 0.25
CDH1-209ENST00000566510 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
CDH1-209ENST00000566510 CEP126Q9P2H0 1117 aa16.64■□□□□ 0.25
CDH1-209ENST00000566510 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.25
CDH1-209ENST00000566510 ILDR1Q86SU0 546 aaPredicted RBP16.63■□□□□ 0.25
CDH1-209ENST00000566510 CEP57L1Q8IYX8 460 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 CCDC112Q8NEF3 446 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 MYH15Q9Y2K3 1946 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 CTIFO43310 598 aaKnown RBP16.63■□□□□ 0.25
CDH1-209ENST00000566510 SKILP12757 684 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 STK38Q15208 465 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 CDC25BP30305 580 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 DHX40Q8IX18 779 aaKnown RBP16.63■□□□□ 0.25
CDH1-209ENST00000566510 ENGASEQ8NFI3 743 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 MRPS27Q92552 414 aaKnown RBP16.63■□□□□ 0.25
CDH1-209ENST00000566510 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
CDH1-209ENST00000566510 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
CDH1-209ENST00000566510 USP27XA6NNY8 438 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 FDPSP14324 419 aaKnown RBP16.62■□□□□ 0.25
CDH1-209ENST00000566510 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 CCDC158Q5M9N0 1113 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 CEP135Q66GS9 1140 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 SARM1Q6SZW1 724 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 MRFAP1L1Q96HT8 127 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 C8orf76Q96K31 380 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 NAT10Q9H0A0 1025 aaKnown RBP16.62■□□□□ 0.25
CDH1-209ENST00000566510 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
CDH1-209ENST00000566510 IMMTQ16891 758 aaKnown RBP16.62■□□□□ 0.25
CDH1-209ENST00000566510 ATL3Q6DD88 541 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 GPR108Q9NPR9 543 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 GJB4Q9NTQ9 266 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 PAXBP1Q9Y5B6 917 aa16.62■□□□□ 0.25
CDH1-209ENST00000566510 CLIC4Q9Y696 253 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms