RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PTCH2Q9Y6C5 1203 aa11.88□□□□□ -0.51
VPS9D1-205ENST00000565452 TESPA1A2RU30 521 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 ANXA1P04083 346 aa11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 SUPT20HL1Q3ZLR7 823 aa11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 PRO3102Q9H379 93 aa11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 ZFYVE28Q9HCC9 887 aa11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 HTTP42858 3142 aa11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 DUOX1Q9NRD9 1551 aa11.87□□□□□ -0.51
VPS9D1-205ENST00000565452 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 WDHD1O75717 1129 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 KIF22Q14807 665 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 PROSER3Q2NL68 480 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 ZNF428Q96B54 188 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 PTPN18Q99952 460 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 COL3A1P02461 1466 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-205ENST00000565452 CENPFP49454 3210 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 GNRH1P01148 92 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 STRIP1Q5VSL9 837 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 SH3TC2Q8TF17 1288 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 CLMNQ96JQ2 1002 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 XDHP47989 1333 aa11.85□□□□□ -0.51
VPS9D1-205ENST00000565452 SASH1O94885 1247 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 IREB2P48200 963 aaKnown RBP11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 PRMT2P55345 433 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 CAP1Q01518 475 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 FZD1Q9UP38 647 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
VPS9D1-205ENST00000565452 ATP5J2-PTCD1G3V325 749 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 TRIM28Q13263 835 aaKnown RBP11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 CCDC152Q4G0S7 254 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 ANKRD13AQ8IZ07 590 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 PLBD2Q8NHP8 589 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 MXD3Q9BW11 206 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 COL6A3P12111 3177 aa11.83□□□□□ -0.52
VPS9D1-205ENST00000565452 RANBP2P49792 3224 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 DLGAP5Q15398 846 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 TAF1CQ15572 869 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 TTLL5Q6EMB2 1281 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 COL25A1Q9BXS0 654 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 COA1Q9GZY4 146 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 BABAM1Q9NWV8 329 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 STXBP5LQ9Y2K9 1186 aa11.82□□□□□ -0.52
VPS9D1-205ENST00000565452 BRCA2P51587 3418 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 SOX1O00570 391 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 EVI5O60447 810 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 USP2O75604 605 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 GJA5P36382 358 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 GJA8P48165 433 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 DEFB123Q8N688 67 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 PNNQ9H307 717 aaKnown RBP11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 ANKRD36CQ5JPF3 1778 aa11.81□□□□□ -0.52
VPS9D1-205ENST00000565452 RBBP6Q7Z6E9 1792 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 MYO1BO43795 1136 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 GJB1P08034 283 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 HOXD10P28358 340 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 GTF2A2P52657 109 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 ZBTB38Q8NAP3 1195 aaPredicted RBP11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 OPTNQ96CV9 577 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 ZBED3Q96IU2 234 aaPredicted RBP11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 MS4A4AQ96JQ5 239 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
VPS9D1-205ENST00000565452 PDE8AO60658 829 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 CAPN2P17655 700 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 MTFR1Q15390 333 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 UBE2Q1Q7Z7E8 422 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 HELBQ8NG08 1087 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 ELP3Q9H9T3 547 aa11.79□□□□□ -0.52
VPS9D1-205ENST00000565452 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 TLR2O60603 784 aa11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 CCL15Q16663 113 aa11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 BRI3BPQ8WY22 251 aa11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 RNF208Q9H0X6 261 aa11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 BIN2Q9UBW5 565 aaPredicted RBP11.78□□□□□ -0.52
VPS9D1-205ENST00000565452 LRRC37AA6NMS7 1700 aa11.77□□□□□ -0.52
VPS9D1-205ENST00000565452 COL1A1P02452 1464 aaPredicted RBP11.77□□□□□ -0.52
VPS9D1-205ENST00000565452 CCL5P13501 91 aa11.77□□□□□ -0.53
VPS9D1-205ENST00000565452 PPP2R1AP30153 589 aa11.77□□□□□ -0.53
VPS9D1-205ENST00000565452 GRK4P32298 578 aa11.77□□□□□ -0.53
VPS9D1-205ENST00000565452 CCT4P50991 539 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms