RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 TTLL5Q6EMB2 1281 aa18.18■□□□□ 0.5
GTF3C1-205ENST00000564747 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
GTF3C1-205ENST00000564747 A1BGP04217 495 aa18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 IFIT1P09914 478 aaKnown RBP18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 IL15P40933 162 aaPredicted RBP18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 CHAF1AQ13111 956 aaPredicted RBP18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 CLIP2Q9UDT6 1046 aa18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 A0A087WWV3 80 aa18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 SNW1Q13573 536 aaKnown RBP18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 IQCB1Q15051 598 aa18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 MAST3O60307 1309 aa18.17■□□□□ 0.5
GTF3C1-205ENST00000564747 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 PUS3Q9BZE2 481 aaKnown RBP18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 GPR108Q9NPR9 543 aa18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 A0A1B0GUL7 405 aa18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 EYA2O00167 538 aa18.16■□□□□ 0.5
GTF3C1-205ENST00000564747 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 M0R2C6 588 aa18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 RNF113AO15541 343 aaKnown RBP18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 ILDR1Q86SU0 546 aaPredicted RBP18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 CACTINQ8WUQ7 758 aaKnown RBP18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 COL18A1P39060 1754 aa18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 SALL1Q9NSC2 1324 aa18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 ATF3P18847 181 aa18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 GPHNQ9NQX3 736 aaPredicted RBP18.15■□□□□ 0.5
GTF3C1-205ENST00000564747 GOLGA6L19H0YKK7 550 aa18.14■□□□□ 0.5
GTF3C1-205ENST00000564747 OSBP2Q969R2 916 aa18.14■□□□□ 0.5
GTF3C1-205ENST00000564747 C16orf45Q96MC5 204 aaPredicted RBP18.14■□□□□ 0.5
GTF3C1-205ENST00000564747 CAVIN2O95810 425 aa18.14■□□□□ 0.49
GTF3C1-205ENST00000564747 ERCC4Q92889 916 aaPredicted RBP18.14■□□□□ 0.49
GTF3C1-205ENST00000564747 ME1P48163 572 aa18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 CCDC73Q6ZRK6 1079 aa18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 ENGASEQ8NFI3 743 aa18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 ZNF274Q96GC6 653 aaPredicted RBP18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 FDPSP14324 419 aaKnown RBP18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 ZNF396Q96N95 335 aaPredicted RBP18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 GLI3P10071 1580 aa18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 CTAGE5O15320 804 aa18.13■□□□□ 0.49
GTF3C1-205ENST00000564747 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 HAND2P61296 217 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 STX1AQ16623 288 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 FAM160A1Q05DH4 1040 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 ARID5BQ14865 1188 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 FSIP1Q8NA03 581 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 CARMIL3Q8ND23 1372 aa18.12■□□□□ 0.49
GTF3C1-205ENST00000564747 SARM1Q6SZW1 724 aa18.11■□□□□ 0.49
GTF3C1-205ENST00000564747 PCDHA7Q9UN72 937 aa18.11■□□□□ 0.49
GTF3C1-205ENST00000564747 BECN2A8MW95 431 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 FOXP2O15409 715 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 CDC25BP30305 580 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 ADORA1P30542 326 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 ATL3Q6DD88 541 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 DHX40Q8IX18 779 aaKnown RBP18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 FBXW7Q969H0 707 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 CEP126Q9P2H0 1117 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 MYH15Q9Y2K3 1946 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 CTIFO43310 598 aaKnown RBP18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 TNNT1P13805 278 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 PPP4R3BQ5MIZ7 849 aa18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
GTF3C1-205ENST00000564747 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 CIAO1O76071 339 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 WASHC4Q2M389 1173 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 LRRC8AQ8IWT6 810 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 ABCC6O95255 1503 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 HSP90AB3PQ58FF7 597 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 TICAM2Q86XR7 235 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 MRFAP1L1Q96HT8 127 aa18.09■□□□□ 0.49
GTF3C1-205ENST00000564747 A0A1B0GVL5 298 aa18.08■□□□□ 0.49
GTF3C1-205ENST00000564747 GORABQ5T7V8 394 aa18.08■□□□□ 0.49
GTF3C1-205ENST00000564747 RAB11FIP4Q86YS3 637 aa18.08■□□□□ 0.49
GTF3C1-205ENST00000564747 ZCRB1Q8TBF4 217 aaKnown RBP18.08■□□□□ 0.49
GTF3C1-205ENST00000564747 ADAMTSL3P82987 1691 aa18.08■□□□□ 0.49
GTF3C1-205ENST00000564747 FGAP02671 866 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 POLR3DP05423 398 aaPredicted RBP18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 SCARF1Q14162 830 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 TPD52L1Q16890 204 aaPredicted RBP18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 XAGE2Q96GT9 111 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 ANO10Q9NW15 660 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 LAMB4A4D0S4 1761 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 EVCP57679 992 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 CBX1P83916 185 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 CCDC57Q2TAC2 916 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 CCDC158Q5M9N0 1113 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 TTC39AQ5SRH9 613 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 FMR1NBQ8N0W7 255 aaPredicted RBP18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 ANKRD7Q92527 254 aa18.08■□□□□ 0.48
GTF3C1-205ENST00000564747 GJB4Q9NTQ9 266 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms