RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PAG1Q9NWQ8 432 aa21.29■■□□□ 1
GDE1-203ENST00000564172 MINPP1Q9UNW1 487 aa21.29■■□□□ 1
GDE1-203ENST00000564172 SLC5A1P13866 664 aa21.28■■□□□ 1
GDE1-203ENST00000564172 DEFB132Q7Z7B7 95 aa21.28■■□□□ 1
GDE1-203ENST00000564172 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
GDE1-203ENST00000564172 TNRC6CQ9HCJ0 1690 aaKnown RBP21.28■■□□□ 1
GDE1-203ENST00000564172 TAF1P21675 1872 aa21.28■■□□□ 1
GDE1-203ENST00000564172 ESPNB1AK53 854 aa21.28■■□□□ 1
GDE1-203ENST00000564172 GOLIM4O00461 696 aa21.28■■□□□ 1
GDE1-203ENST00000564172 ZNF512BQ96KM6 892 aaPredicted RBP21.28■■□□□ 1
GDE1-203ENST00000564172 KIF2CQ99661 725 aa21.28■■□□□ 1
GDE1-203ENST00000564172 ANO2Q9NQ90 1003 aa21.28■■□□□ 1
GDE1-203ENST00000564172 SCARF1Q14162 830 aa21.27■■□□□ 1
GDE1-203ENST00000564172 KBTBD3Q8NAB2 608 aa21.27■■□□□ 1
GDE1-203ENST00000564172 STK32BQ9NY57 414 aa21.27■■□□□ 1
GDE1-203ENST00000564172 CRY2Q49AN0 593 aa21.27■□□□□ 0.99
GDE1-203ENST00000564172 CCDC102BQ68D86 513 aa21.27■□□□□ 0.99
GDE1-203ENST00000564172 SPEF2Q9C093 1822 aa21.26■□□□□ 0.99
GDE1-203ENST00000564172 FAM227BQ96M60 508 aa21.26■□□□□ 0.99
GDE1-203ENST00000564172 GOLGA6L3A6NEY3 463 aa21.25■□□□□ 0.99
GDE1-203ENST00000564172 PHKA1P46020 1223 aa21.25■□□□□ 0.99
GDE1-203ENST00000564172 FKBP4Q02790 459 aaKnown RBP eCLIP21.25■□□□□ 0.99
GDE1-203ENST00000564172 NMIQ13287 307 aaPredicted RBP21.25■□□□□ 0.99
GDE1-203ENST00000564172 SNRKQ9NRH2 765 aa21.25■□□□□ 0.99
GDE1-203ENST00000564172 EPB41L2O43491 1005 aaKnown RBP21.25■□□□□ 0.99
GDE1-203ENST00000564172 ANTXR1Q9H6X2 564 aa21.25■□□□□ 0.99
GDE1-203ENST00000564172 RFX7Q2KHR2 1363 aa21.24■□□□□ 0.99
GDE1-203ENST00000564172 MCAMP43121 646 aa21.24■□□□□ 0.99
GDE1-203ENST00000564172 GRAPQ13588 217 aa21.24■□□□□ 0.99
GDE1-203ENST00000564172 GRAPLQ8TC17 118 aaPredicted RBP21.24■□□□□ 0.99
GDE1-203ENST00000564172 MMP10P09238 476 aa21.24■□□□□ 0.99
GDE1-203ENST00000564172 UBE4AQ14139 1066 aa21.24■□□□□ 0.99
GDE1-203ENST00000564172 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
GDE1-203ENST00000564172 A0A0D9SFI3 127 aa21.23■□□□□ 0.99
GDE1-203ENST00000564172 KLRG2A4D1S0 409 aaPredicted RBP21.23■□□□□ 0.99
GDE1-203ENST00000564172 ARID4AP29374 1257 aaPredicted RBP21.23■□□□□ 0.99
GDE1-203ENST00000564172 ZAP70P43403 619 aa21.23■□□□□ 0.99
GDE1-203ENST00000564172 MSL1Q68DK7 614 aa21.23■□□□□ 0.99
GDE1-203ENST00000564172 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
GDE1-203ENST00000564172 TICAM2Q86XR7 235 aa21.23■□□□□ 0.99
GDE1-203ENST00000564172 UQCRFS1P1P0C7P4 283 aa21.23■□□□□ 0.99
GDE1-203ENST00000564172 PI16Q6UXB8 463 aa21.23■□□□□ 0.99
GDE1-203ENST00000564172 LSG1Q9H089 658 aaKnown RBP21.23■□□□□ 0.99
GDE1-203ENST00000564172 WTIPA6NIX2 430 aaPredicted RBP21.22■□□□□ 0.99
GDE1-203ENST00000564172 KIAA1211Q6ZU35 1233 aa21.22■□□□□ 0.99
GDE1-203ENST00000564172 PARP3Q9Y6F1 533 aa21.22■□□□□ 0.99
GDE1-203ENST00000564172 CHGBP05060 677 aa21.21■□□□□ 0.99
GDE1-203ENST00000564172 PAXIP1Q6ZW49 1069 aaPredicted RBP21.21■□□□□ 0.99
GDE1-203ENST00000564172 ANKRD2Q9GZV1 360 aa21.21■□□□□ 0.99
GDE1-203ENST00000564172 RAD50Q92878 1312 aa21.21■□□□□ 0.99
GDE1-203ENST00000564172 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
GDE1-203ENST00000564172 BCAMP50895 628 aa21.21■□□□□ 0.99
GDE1-203ENST00000564172 BRIP1Q9BX63 1249 aa21.21■□□□□ 0.99
GDE1-203ENST00000564172 DMTNQ08495 405 aa21.2■□□□□ 0.98
GDE1-203ENST00000564172 RBM17Q96I25 401 aaKnown RBP21.2■□□□□ 0.98
GDE1-203ENST00000564172 ARAP2Q8WZ64 1704 aa21.2■□□□□ 0.98
GDE1-203ENST00000564172 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
GDE1-203ENST00000564172 ISY1Q9ULR0 285 aaKnown RBP21.2■□□□□ 0.98
GDE1-203ENST00000564172 HMG20BQ9P0W2 317 aa21.19■□□□□ 0.98
GDE1-203ENST00000564172 CYP2E1P05181 493 aaPredicted RBP21.19■□□□□ 0.98
GDE1-203ENST00000564172 MCCP23508 829 aa21.19■□□□□ 0.98
GDE1-203ENST00000564172 BECN1Q14457 450 aa21.19■□□□□ 0.98
GDE1-203ENST00000564172 CCDC125Q86Z20 511 aa21.19■□□□□ 0.98
GDE1-203ENST00000564172 NRXN2Q9P2S2 1712 aa21.18■□□□□ 0.98
GDE1-203ENST00000564172 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
GDE1-203ENST00000564172 MRE11P49959 708 aa21.18■□□□□ 0.98
GDE1-203ENST00000564172 PTH1RQ03431 593 aa21.18■□□□□ 0.98
GDE1-203ENST00000564172 AKAP11Q9UKA4 1901 aa21.18■□□□□ 0.98
GDE1-203ENST00000564172 HSPA4P34932 840 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 RASGRF1Q13972 1273 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 ZNF589Q86UQ0 364 aaPredicted RBP21.17■□□□□ 0.98
GDE1-203ENST00000564172 CRAMP1Q96RY5 1269 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 SEC62Q99442 399 aaKnown RBP21.17■□□□□ 0.98
GDE1-203ENST00000564172 TBC1D2Q9BYX2 928 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 RNF113AO15541 343 aaKnown RBP21.17■□□□□ 0.98
GDE1-203ENST00000564172 KCNJ4P48050 445 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 SPATA5Q8NB90 893 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 A0A1B0GUL6 1792 aa21.17■□□□□ 0.98
GDE1-203ENST00000564172 ZNF804BA4D1E1 1349 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 CCDC171Q6TFL3 1326 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 BBOX1O75936 387 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 GYG1P46976 350 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 TTF1Q15361 905 aaPredicted RBP21.16■□□□□ 0.98
GDE1-203ENST00000564172 LRRFIP1Q32MZ4 808 aaKnown RBP21.16■□□□□ 0.98
GDE1-203ENST00000564172 SLFNL1Q499Z3 407 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 MCMDC2Q4G0Z9 681 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 ZMYM1Q5SVZ6 1142 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 PALD1Q9ULE6 856 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 ANAPC15P60006 121 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 RABEP1Q15276 862 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 SLC51AQ86UW1 340 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 FAM84BQ96KN1 310 aaPredicted RBP21.16■□□□□ 0.98
GDE1-203ENST00000564172 HELLSQ9NRZ9 838 aa21.16■□□□□ 0.98
GDE1-203ENST00000564172 CAVIN4Q5BKX8 364 aa21.15■□□□□ 0.98
GDE1-203ENST00000564172 PDGFDQ9GZP0 370 aaPredicted RBP21.15■□□□□ 0.98
GDE1-203ENST00000564172 KIF20AO95235 890 aa21.14■□□□□ 0.98
GDE1-203ENST00000564172 ZFYP08048 801 aaPredicted RBP21.14■□□□□ 0.98
GDE1-203ENST00000564172 SRGNP10124 158 aa21.14■□□□□ 0.98
GDE1-203ENST00000564172 MAP4K1Q92918 833 aa21.14■□□□□ 0.98
GDE1-203ENST00000564172 SNX21Q969T3 373 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms