RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 RPS6KB1P23443 525 aa19.54■□□□□ 0.72
MEIS3-209ENST00000561040 SEC62Q99442 399 aaKnown RBP19.54■□□□□ 0.72
MEIS3-209ENST00000561040 RTCBQ9Y3I0 505 aaKnown RBP19.54■□□□□ 0.72
MEIS3-209ENST00000561040 MAST3O60307 1309 aa19.54■□□□□ 0.72
MEIS3-209ENST00000561040 ZPR1O75312 459 aa19.53■□□□□ 0.72
MEIS3-209ENST00000561040 HMGB2P26583 209 aaKnown RBP19.53■□□□□ 0.72
MEIS3-209ENST00000561040 SF3B3Q15393 1217 aaKnown RBP19.53■□□□□ 0.72
MEIS3-209ENST00000561040 SLC10A5Q5PT55 438 aa19.53■□□□□ 0.72
MEIS3-209ENST00000561040 C4BP0C0L5 1744 aa19.53■□□□□ 0.72
MEIS3-209ENST00000561040 ZAP70P43403 619 aa19.53■□□□□ 0.72
MEIS3-209ENST00000561040 CCDC129Q6ZRS4 1044 aa19.53■□□□□ 0.72
MEIS3-209ENST00000561040 APPBP2Q92624 585 aa19.53■□□□□ 0.72
MEIS3-209ENST00000561040 WDR33Q9C0J8 1336 aaKnown RBP19.52■□□□□ 0.72
MEIS3-209ENST00000561040 GNPATO15228 680 aa19.52■□□□□ 0.72
MEIS3-209ENST00000561040 BRD1O95696 1058 aa19.52■□□□□ 0.72
MEIS3-209ENST00000561040 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
MEIS3-209ENST00000561040 NEK1Q96PY6 1258 aa19.52■□□□□ 0.72
MEIS3-209ENST00000561040 CTNNA3Q9UI47 895 aa19.52■□□□□ 0.72
MEIS3-209ENST00000561040 MCAMP43121 646 aa19.51■□□□□ 0.71
MEIS3-209ENST00000561040 CCDC102BQ68D86 513 aa19.51■□□□□ 0.71
MEIS3-209ENST00000561040 BCL11BQ9C0K0 894 aaPredicted RBP19.51■□□□□ 0.71
MEIS3-209ENST00000561040 HSPD1P10809 573 aaKnown RBP19.51■□□□□ 0.71
MEIS3-209ENST00000561040 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
MEIS3-209ENST00000561040 SCARF1Q14162 830 aa19.51■□□□□ 0.71
MEIS3-209ENST00000561040 PTF1AQ7RTS3 328 aa19.51■□□□□ 0.71
MEIS3-209ENST00000561040 SETDB2Q96T68 719 aa19.51■□□□□ 0.71
MEIS3-209ENST00000561040 SMC3Q9UQE7 1217 aa19.51■□□□□ 0.71
MEIS3-209ENST00000561040 A0A1B0GUL6 1792 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 CYP21A2P08686 494 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 CPA1P15085 419 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 ERFEQ4G0M1 354 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 SEC31BQ9NQW1 1179 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 ZDHHC9Q9Y397 364 aa19.5■□□□□ 0.71
MEIS3-209ENST00000561040 DOCK2Q92608 1830 aa19.49■□□□□ 0.71
MEIS3-209ENST00000561040 PKP1Q13835 747 aa19.49■□□□□ 0.71
MEIS3-209ENST00000561040 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
MEIS3-209ENST00000561040 LAMA4Q16363 1823 aa19.49■□□□□ 0.71
MEIS3-209ENST00000561040 C4AP0C0L4 1744 aa19.49■□□□□ 0.71
MEIS3-209ENST00000561040 ADRA2BP18089 450 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 UBE3CQ15386 1083 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 TBC1D9BQ66K14 1250 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 BCL2L12Q9HB09 334 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 M0R2C6 588 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 CHGBP05060 677 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 PHKA1P46020 1223 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 KCNQ4P56696 695 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 OSBP2Q969R2 916 aa19.48■□□□□ 0.71
MEIS3-209ENST00000561040 ADD2P35612 726 aa19.47■□□□□ 0.71
MEIS3-209ENST00000561040 TPTE2Q6XPS3 522 aa19.47■□□□□ 0.71
MEIS3-209ENST00000561040 QTRT2Q9H974 415 aaKnown RBP19.47■□□□□ 0.71
MEIS3-209ENST00000561040 BSDC1Q9NW68 430 aaPredicted RBP19.47■□□□□ 0.71
MEIS3-209ENST00000561040 CHRNDQ07001 517 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 MCTP1Q6DN14 999 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 NBPF5PQ86XG9 351 aaPredicted RBP19.46■□□□□ 0.71
MEIS3-209ENST00000561040 SPATA5Q8NB90 893 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 HELBQ8NG08 1087 aaPredicted RBP19.46■□□□□ 0.71
MEIS3-209ENST00000561040 NLRP3Q96P20 1036 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 ME3Q16798 604 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 TRAPPC3LQ5T215 181 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 FAM182BQ5T319 152 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 FAM196AQ6ZSG2 479 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 CHMP4CQ96CF2 233 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 TPCN1Q9ULQ1 816 aa19.46■□□□□ 0.71
MEIS3-209ENST00000561040 ISY1Q9ULR0 285 aaKnown RBP19.46■□□□□ 0.71
MEIS3-209ENST00000561040 RFC4P35249 363 aa19.45■□□□□ 0.7
MEIS3-209ENST00000561040 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
MEIS3-209ENST00000561040 IMMTQ16891 758 aaKnown RBP19.45■□□□□ 0.7
MEIS3-209ENST00000561040 KLHL40Q2TBA0 621 aa19.45■□□□□ 0.7
MEIS3-209ENST00000561040 BICDL1Q6ZP65 573 aa19.45■□□□□ 0.7
MEIS3-209ENST00000561040 DHX32Q7L7V1 743 aaKnown RBP19.45■□□□□ 0.7
MEIS3-209ENST00000561040 CCDC83Q8IWF9 413 aa19.45■□□□□ 0.7
MEIS3-209ENST00000561040 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
MEIS3-209ENST00000561040 ATP6V1DQ9Y5K8 247 aa19.45■□□□□ 0.7
MEIS3-209ENST00000561040 MAP3K12Q12852 859 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 TOB2Q14106 344 aaPredicted RBP19.44■□□□□ 0.7
MEIS3-209ENST00000561040 SLC27A3Q5K4L6 730 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 SLC9C2Q5TAH2 1124 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 PI16Q6UXB8 463 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 FAM43AQ8N2R8 423 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 TAF6LQ9Y6J9 622 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 LARGE1O95461 756 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 PDCP20941 246 aa19.44■□□□□ 0.7
MEIS3-209ENST00000561040 L1TD1Q5T7N2 865 aaKnown RBP19.44■□□□□ 0.7
MEIS3-209ENST00000561040 GNL3LQ9NVN8 582 aaKnown RBP19.44■□□□□ 0.7
MEIS3-209ENST00000561040 SRP68Q9UHB9 627 aaKnown RBP19.44■□□□□ 0.7
MEIS3-209ENST00000561040 MYO5AQ9Y4I1 1855 aaKnown RBP19.44■□□□□ 0.7
MEIS3-209ENST00000561040 GPAA1O43292 621 aa19.43■□□□□ 0.7
MEIS3-209ENST00000561040 STX6O43752 255 aa19.43■□□□□ 0.7
MEIS3-209ENST00000561040 SLFNL1Q499Z3 407 aa19.43■□□□□ 0.7
MEIS3-209ENST00000561040 PIH1D3Q9NQM4 214 aaKnown RBP19.43■□□□□ 0.7
MEIS3-209ENST00000561040 IDH1O75874 414 aaKnown RBP19.42■□□□□ 0.7
MEIS3-209ENST00000561040 GJB2P29033 226 aa19.42■□□□□ 0.7
MEIS3-209ENST00000561040 LARP6Q9BRS8 491 aaKnown RBP19.42■□□□□ 0.7
MEIS3-209ENST00000561040 PUS7LQ9H0K6 701 aaKnown RBP19.42■□□□□ 0.7
MEIS3-209ENST00000561040 CARMIL3Q8ND23 1372 aa19.42■□□□□ 0.7
MEIS3-209ENST00000561040 BRWD3Q6RI45 1802 aa19.42■□□□□ 0.7
MEIS3-209ENST00000561040 UBR3Q6ZT12 1888 aa19.42■□□□□ 0.7
MEIS3-209ENST00000561040 E7EWF7 191 aa19.41■□□□□ 0.7
MEIS3-209ENST00000561040 ZSCAN22P10073 491 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms