RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.5□□□□□ -1.05
PSMA4-221ENST00000560842 ARID1BQ8NFD5 2236 aaPredicted RBP8.5□□□□□ -1.05
PSMA4-221ENST00000560842 LINC01387J3KSC0 135 aa8.49□□□□□ -1.05
PSMA4-221ENST00000560842 TM4SF5O14894 197 aa8.49□□□□□ -1.05
PSMA4-221ENST00000560842 UTP4Q969X6 686 aaKnown RBP8.49□□□□□ -1.05
PSMA4-221ENST00000560842 VTI1AQ96AJ9 217 aa8.49□□□□□ -1.05
PSMA4-221ENST00000560842 DBNDD2Q9BQY9 259 aa8.49□□□□□ -1.05
PSMA4-221ENST00000560842 HMX2A2RU54 273 aa8.48□□□□□ -1.05
PSMA4-221ENST00000560842 CAPN12Q6ZSI9 719 aa8.48□□□□□ -1.05
PSMA4-221ENST00000560842 ACAD11Q709F0 780 aa8.48□□□□□ -1.05
PSMA4-221ENST00000560842 TRAIPQ9BWF2 469 aa8.48□□□□□ -1.05
PSMA4-221ENST00000560842 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
PSMA4-221ENST00000560842 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
PSMA4-221ENST00000560842 MYRFLQ96LU7 910 aa8.47□□□□□ -1.05
PSMA4-221ENST00000560842 KCNK4Q9NYG8 393 aa8.47□□□□□ -1.05
PSMA4-221ENST00000560842 ADGRE2Q9UHX3 823 aa8.47□□□□□ -1.05
PSMA4-221ENST00000560842 COX20Q5RI15 118 aa8.46□□□□□ -1.06
PSMA4-221ENST00000560842 CLEC10AQ8IUN9 316 aa8.46□□□□□ -1.06
PSMA4-221ENST00000560842 FAM83CQ9BQN1 747 aa8.46□□□□□ -1.06
PSMA4-221ENST00000560842 KIAA1211Q6ZU35 1233 aa8.45□□□□□ -1.06
PSMA4-221ENST00000560842 BRD1O95696 1058 aa8.44□□□□□ -1.06
PSMA4-221ENST00000560842 C16orf46Q6P387 395 aa8.44□□□□□ -1.06
PSMA4-221ENST00000560842 OR13H1Q8NG92 308 aa8.44□□□□□ -1.06
PSMA4-221ENST00000560842 SAP130Q9H0E3 1048 aa8.44□□□□□ -1.06
PSMA4-221ENST00000560842 TNFRSF10BO14763 440 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 CDC27P30260 824 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 DUOXA2Q1HG44 320 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 CEP135Q66GS9 1140 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 TXNDC11Q6PKC3 985 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 TXNDC2Q86VQ3 553 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 FAM20CQ8IXL6 584 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 KLHL23Q8NBE8 558 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 SHKBP1Q8TBC3 707 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 MKNK1Q9BUB5 465 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 SEPT3Q9UH03 358 aa8.43□□□□□ -1.06
PSMA4-221ENST00000560842 FSCN2O14926 492 aa8.42□□□□□ -1.06
PSMA4-221ENST00000560842 SCNN1AP37088 669 aa8.42□□□□□ -1.06
PSMA4-221ENST00000560842 ATP11AP98196 1134 aa8.42□□□□□ -1.06
PSMA4-221ENST00000560842 COL13A1Q5TAT6 717 aaPredicted RBP8.42□□□□□ -1.06
PSMA4-221ENST00000560842 LACRTQ9GZZ8 138 aa8.42□□□□□ -1.06
PSMA4-221ENST00000560842 SMNDC1O75940 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
PSMA4-221ENST00000560842 HYAL2Q12891 473 aa8.41□□□□□ -1.06
PSMA4-221ENST00000560842 TRIP4Q15650 581 aaPredicted RBP8.41□□□□□ -1.06
PSMA4-221ENST00000560842 SPACA7Q96KW9 195 aa8.41□□□□□ -1.06
PSMA4-221ENST00000560842 CARD10Q9BWT7 1032 aa8.41□□□□□ -1.06
PSMA4-221ENST00000560842 BMP3P12645 472 aa8.4□□□□□ -1.06
PSMA4-221ENST00000560842 NPR3P17342 541 aa8.4□□□□□ -1.06
PSMA4-221ENST00000560842 NAA30Q147X3 362 aaPredicted RBP8.4□□□□□ -1.06
PSMA4-221ENST00000560842 FAM117BQ6P1L5 589 aa8.4□□□□□ -1.06
PSMA4-221ENST00000560842 ADAMTSL4Q6UY14 1074 aa8.4□□□□□ -1.06
PSMA4-221ENST00000560842 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.06
PSMA4-221ENST00000560842 BEND4Q6ZU67 534 aa8.4□□□□□ -1.06
PSMA4-221ENST00000560842 HELQQ8TDG4 1101 aa8.4□□□□□ -1.06
PSMA4-221ENST00000560842 GNEQ9Y223 722 aaKnown RBP8.4□□□□□ -1.06
PSMA4-221ENST00000560842 DDX3YO15523 660 aaKnown RBP8.39□□□□□ -1.07
PSMA4-221ENST00000560842 CDC25BP30305 580 aa8.39□□□□□ -1.07
PSMA4-221ENST00000560842 ETFBKMTQ8IXQ9 262 aa8.39□□□□□ -1.07
PSMA4-221ENST00000560842 GTF3C2Q8WUA4 911 aaPredicted RBP8.39□□□□□ -1.07
PSMA4-221ENST00000560842 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
PSMA4-221ENST00000560842 MTMR7Q9Y216 660 aa8.39□□□□□ -1.07
PSMA4-221ENST00000560842 SART1O43290 800 aaKnown RBP8.38□□□□□ -1.07
PSMA4-221ENST00000560842 ADAM11O75078 769 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 BRD2P25440 801 aaKnown RBP8.38□□□□□ -1.07
PSMA4-221ENST00000560842 HOXA10P31260 410 aaPredicted RBP8.38□□□□□ -1.07
PSMA4-221ENST00000560842 JAG1P78504 1218 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 ANKRD34AQ69YU3 496 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 KCNF1Q9H3M0 494 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 STIM2Q9P246 746 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 EGFL7Q9UHF1 273 aa8.38□□□□□ -1.07
PSMA4-221ENST00000560842 WDR64B1ANS9 1081 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 UBAP1LF5GYI3 381 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 UBASH3BQ8TF42 649 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 KLHDC7BQ96G42 594 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 SEC31BQ9NQW1 1179 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 HIF3AQ9Y2N7 669 aa8.37□□□□□ -1.07
PSMA4-221ENST00000560842 KIF4AO95239 1232 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 EPHA1P21709 976 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 PIK3R5Q8WYR1 880 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 KRTAP4-9Q9BYQ8 210 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 PBX4Q9BYU1 374 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 SH2B1Q9NRF2 756 aaPredicted RBP8.36□□□□□ -1.07
PSMA4-221ENST00000560842 PIM2Q9P1W9 311 aa8.36□□□□□ -1.07
PSMA4-221ENST00000560842 PREPP48147 710 aa8.35□□□□□ -1.07
PSMA4-221ENST00000560842 KCNA1Q09470 495 aa8.35□□□□□ -1.07
PSMA4-221ENST00000560842 SF3B2Q13435 895 aaKnown RBP8.35□□□□□ -1.07
PSMA4-221ENST00000560842 ADAM19Q9H013 955 aa8.35□□□□□ -1.07
PSMA4-221ENST00000560842 FAM13BQ9NYF5 915 aa8.35□□□□□ -1.07
PSMA4-221ENST00000560842 PDIA4P13667 645 aaKnown RBP8.34□□□□□ -1.07
PSMA4-221ENST00000560842 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
PSMA4-221ENST00000560842 ECM1Q16610 540 aa8.34□□□□□ -1.07
PSMA4-221ENST00000560842 TTC39BQ5VTQ0 682 aaPredicted RBP8.34□□□□□ -1.07
PSMA4-221ENST00000560842 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
PSMA4-221ENST00000560842 WNT8BQ93098 351 aa8.34□□□□□ -1.07
PSMA4-221ENST00000560842 RNF208Q9H0X6 261 aa8.34□□□□□ -1.07
PSMA4-221ENST00000560842 ZBTB39O15060 712 aa8.33□□□□□ -1.08
PSMA4-221ENST00000560842 ICMTO60725 284 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms