RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
PDE8A-212ENST00000560333 TAF1LQ8IZX4 1826 aa13.58□□□□□ -0.24
PDE8A-212ENST00000560333 H3BM21 787 aa13.58□□□□□ -0.24
PDE8A-212ENST00000560333 MMP10P09238 476 aa13.58□□□□□ -0.24
PDE8A-212ENST00000560333 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
PDE8A-212ENST00000560333 NFAT5O94916 1531 aa13.58□□□□□ -0.24
PDE8A-212ENST00000560333 INSRP06213 1382 aa13.58□□□□□ -0.24
PDE8A-212ENST00000560333 UPP2O95045 317 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 GMPRP36959 345 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 TGFB2P61812 414 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 C6orf118Q5T5N4 469 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 BRCA1P38398 1863 aaKnown RBP13.57□□□□□ -0.24
PDE8A-212ENST00000560333 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
PDE8A-212ENST00000560333 FSHRP23945 695 aa13.56□□□□□ -0.24
PDE8A-212ENST00000560333 MTHFSP49914 203 aa13.56□□□□□ -0.24
PDE8A-212ENST00000560333 SH3D19Q5HYK7 790 aa13.56□□□□□ -0.24
PDE8A-212ENST00000560333 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
PDE8A-212ENST00000560333 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
PDE8A-212ENST00000560333 RASSF7Q02833 373 aa13.55□□□□□ -0.24
PDE8A-212ENST00000560333 COG3Q96JB2 828 aa13.55□□□□□ -0.24
PDE8A-212ENST00000560333 SOBPA7XYQ1 873 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 PDXDC2PQ6P474 469 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
PDE8A-212ENST00000560333 ANKRD24Q8TF21 1146 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 LRRN4Q8WUT4 740 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 FAM117AQ9C073 453 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
PDE8A-212ENST00000560333 LTN1O94822 1766 aa13.53□□□□□ -0.24
PDE8A-212ENST00000560333 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
PDE8A-212ENST00000560333 MAN1A2O60476 641 aa13.53□□□□□ -0.24
PDE8A-212ENST00000560333 BMP2P12643 396 aa13.53□□□□□ -0.24
PDE8A-212ENST00000560333 FKBPLQ9UIM3 349 aa13.53□□□□□ -0.24
PDE8A-212ENST00000560333 SBF1O95248 1867 aa13.53□□□□□ -0.24
PDE8A-212ENST00000560333 GLTPD2A6NH11 291 aa13.52□□□□□ -0.25
PDE8A-212ENST00000560333 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
PDE8A-212ENST00000560333 CCDC116Q8IYX3 515 aa13.52□□□□□ -0.25
PDE8A-212ENST00000560333 MEIOBQ8N635 442 aa13.52□□□□□ -0.25
PDE8A-212ENST00000560333 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
PDE8A-212ENST00000560333 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
PDE8A-212ENST00000560333 RRS1Q15050 365 aaKnown RBP13.51□□□□□ -0.25
PDE8A-212ENST00000560333 PPP2R2DQ66LE6 453 aa13.51□□□□□ -0.25
PDE8A-212ENST00000560333 LINC00528Q8N1L1 170 aa13.51□□□□□ -0.25
PDE8A-212ENST00000560333 ARHGAP9Q9BRR9 750 aa13.51□□□□□ -0.25
PDE8A-212ENST00000560333 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDE8A-212ENST00000560333 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
PDE8A-212ENST00000560333 SSFA2P28290 1259 aa13.5□□□□□ -0.25
PDE8A-212ENST00000560333 DALRD3Q5D0E6 543 aaKnown RBP13.5□□□□□ -0.25
PDE8A-212ENST00000560333 CCDC87Q9NVE4 849 aa13.5□□□□□ -0.25
PDE8A-212ENST00000560333 MAP3K19Q56UN5 1328 aa13.49□□□□□ -0.25
PDE8A-212ENST00000560333 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
PDE8A-212ENST00000560333 MCOLN1Q9GZU1 580 aa13.49□□□□□ -0.25
PDE8A-212ENST00000560333 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
PDE8A-212ENST00000560333 FAM181BA6NEQ2 426 aa13.48□□□□□ -0.25
PDE8A-212ENST00000560333 NR6A1Q15406 480 aa13.48□□□□□ -0.25
PDE8A-212ENST00000560333 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
PDE8A-212ENST00000560333 ADAMTS8Q9UP79 889 aa13.48□□□□□ -0.25
PDE8A-212ENST00000560333 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
PDE8A-212ENST00000560333 AP1G2O75843 785 aa13.47□□□□□ -0.25
PDE8A-212ENST00000560333 KCNA3P22001 575 aa13.47□□□□□ -0.25
PDE8A-212ENST00000560333 SOX10P56693 466 aa13.47□□□□□ -0.25
PDE8A-212ENST00000560333 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
PDE8A-212ENST00000560333 LTV1Q96GA3 475 aaPredicted RBP13.47□□□□□ -0.25
PDE8A-212ENST00000560333 C4AP0C0L4 1744 aa13.47□□□□□ -0.25
PDE8A-212ENST00000560333 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
PDE8A-212ENST00000560333 IL13P35225 146 aa13.46□□□□□ -0.25
PDE8A-212ENST00000560333 MAP2K1Q02750 393 aaPredicted RBP13.46□□□□□ -0.25
PDE8A-212ENST00000560333 ZSCAN1Q8NBB4 408 aa13.46□□□□□ -0.25
PDE8A-212ENST00000560333 SLC10A4Q96EP9 437 aa13.46□□□□□ -0.25
PDE8A-212ENST00000560333 CDV3Q9UKY7 258 aaKnown RBP13.46□□□□□ -0.25
PDE8A-212ENST00000560333 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
PDE8A-212ENST00000560333 PPP1R26Q5T8A7 1209 aaPredicted RBP13.45□□□□□ -0.26
PDE8A-212ENST00000560333 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
PDE8A-212ENST00000560333 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
PDE8A-212ENST00000560333 PGPEP1Q9NXJ5 209 aa13.45□□□□□ -0.26
PDE8A-212ENST00000560333 TMEM88BA6NKF7 163 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 LMNB1P20700 586 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 CHRNA5P30532 468 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 PTK2Q05397 1052 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 HSP90AB2PQ58FF8 381 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 MPRIPQ6WCQ1 1025 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 KCTD15Q96SI1 283 aaPredicted RBP13.44□□□□□ -0.26
PDE8A-212ENST00000560333 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
PDE8A-212ENST00000560333 MEGF6O75095 1541 aa13.44□□□□□ -0.26
PDE8A-212ENST00000560333 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
PDE8A-212ENST00000560333 HOXC9P31274 260 aa13.43□□□□□ -0.26
PDE8A-212ENST00000560333 GRM1Q13255 1194 aa13.43□□□□□ -0.26
PDE8A-212ENST00000560333 PARP3Q9Y6F1 533 aa13.43□□□□□ -0.26
PDE8A-212ENST00000560333 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
PDE8A-212ENST00000560333 FLT4P35916 1363 aa13.43□□□□□ -0.26
PDE8A-212ENST00000560333 PASKQ96RG2 1323 aa13.42□□□□□ -0.26
PDE8A-212ENST00000560333 WDR33Q9C0J8 1336 aaKnown RBP13.42□□□□□ -0.26
PDE8A-212ENST00000560333 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
PDE8A-212ENST00000560333 DGKZQ13574 1117 aa13.42□□□□□ -0.26
PDE8A-212ENST00000560333 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
PDE8A-212ENST00000560333 IP6K1Q92551 441 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms