RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, human

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF111-204	ENST00000559077	CYP2U1	Q7Z449	544 aa		11.1	□□□□□ -0.63
RNF111-204	ENST00000559077	PNN	Q9H307	717 aa	Known RBP	11.1	□□□□□ -0.63
RNF111-204	ENST00000559077	SUV39H2	Q9H5I1	410 aa		11.1	□□□□□ -0.63
RNF111-204	ENST00000559077	NFAT5	O94916	1531 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	CPD	O75976	1380 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	PIK3R2	O00459	728 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	MTHFS	P49914	203 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	WDR43	Q15061	677 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	NGEF	Q8N5V2	710 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	CFHR5	Q9BXR6	569 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	GRIP2	Q9C0E4	1043 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	ARHGEF10L	Q9HCE6	1279 aa		11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	BLM	P54132	1417 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF111-204	ENST00000559077	C1QTNF9B	B2RNN3	333 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	GC	P02774	474 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	BMP4	P12644	408 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	PHKA2	P46019	1235 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	SCTR	P47872	440 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	CLN3	Q13286	438 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	GOLGA6L1	Q8N7Z2	621 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	POLK	Q9UBT6	870 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	PHLPP1	O60346	1717 aa		11.08	□□□□□ -0.64
RNF111-204	ENST00000559077	MARF1	Q9Y4F3	1742 aa	Known RBP	11.07	□□□□□ -0.64
RNF111-204	ENST00000559077	PLEKHG2	Q9H7P9	1386 aa		11.07	□□□□□ -0.64
RNF111-204	ENST00000559077	COL16A1	Q07092	1604 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF111-204	ENST00000559077	SPATA31C2	B4DYI2	1134 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	DIAPH1	O60610	1272 aa	Known RBP	11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	CSB-PGBD3	P0DP91	1061 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	TNNT2	P45379	298 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	AMPH	P49418	695 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	ERVK-9	P63128	1117 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	XPC	Q01831	940 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	CNGB1	Q14028	1251 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	WDR44	Q5JSH3	913 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	PGBD3	Q8N328	593 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	PNISR	Q8TF01	805 aa	Known RBP	11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	SEMA6B	Q9H3T3	888 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	RAB6B	Q9NRW1	208 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	TBC1D2B	Q9UPU7	963 aa		11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	MAP2	P11137	1827 aa	Known RBP	11.06	□□□□□ -0.64
RNF111-204	ENST00000559077	JCAD	Q9P266	1359 aa		11.05	□□□□□ -0.64
RNF111-204	ENST00000559077	ARHGEF25	Q86VW2	580 aa		11.05	□□□□□ -0.64
RNF111-204	ENST00000559077	CRYBG1	Q9Y4K1	1723 aa		11.05	□□□□□ -0.64
RNF111-204	ENST00000559077	COL3A1	P02461	1466 aa	Predicted RBP	11.05	□□□□□ -0.64
RNF111-204	ENST00000559077	MAP3K19	Q56UN5	1328 aa		11.05	□□□□□ -0.64
RNF111-204	ENST00000559077	SHPRH	Q149N8	1683 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	GNB5	O14775	395 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	NEFM	P07197	916 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	GTF2E1	P29083	439 aa	Predicted RBP	11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	PIP4K2B	P78356	416 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	ZMYM1	Q5SVZ6	1142 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	RNF20	Q5VTR2	975 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	IP6K1	Q92551	441 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	PCDHB11	Q9Y5F2	797 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	SPATA31A6	Q5VVP1	1343 aa		11.04	□□□□□ -0.64
RNF111-204	ENST00000559077	DOC2B	Q14184	412 aa		11.03	□□□□□ -0.64
RNF111-204	ENST00000559077	CD163	Q86VB7	1156 aa		11.03	□□□□□ -0.64
RNF111-204	ENST00000559077	KRTAP9-2	Q9BYQ4	174 aa		11.03	□□□□□ -0.64
RNF111-204	ENST00000559077	FAM208A	Q9UK61	1670 aa	Known RBP	11.03	□□□□□ -0.64
RNF111-204	ENST00000559077	LTN1	O94822	1766 aa		11.03	□□□□□ -0.64
RNF111-204	ENST00000559077	ABCA3	Q99758	1704 aa		11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	SCO2	A0A1W2PP80	73 aa		11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	PPM1G	O15355	546 aa	Predicted RBP	11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	HOXC9	P31274	260 aa		11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	RRS1	Q15050	365 aa	Known RBP	11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	NUTM2G	Q5VZR2	741 aa		11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	DDX17	Q92841	729 aa	Known RBP	11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	RUBCNL	Q9H714	662 aa		11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	NOP53	Q9NZM5	478 aa	Known RBP	11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	GGA1	Q9UJY5	639 aa		11.02	□□□□□ -0.65
RNF111-204	ENST00000559077	CHRNA4	P43681	627 aa		11.01	□□□□□ -0.65
RNF111-204	ENST00000559077	IRF5	Q13568	498 aa		11.01	□□□□□ -0.65
RNF111-204	ENST00000559077	LINC00114	Q6XXX2	140 aa		11.01	□□□□□ -0.65
RNF111-204	ENST00000559077	CCDC125	Q86Z20	511 aa		11.01	□□□□□ -0.65
RNF111-204	ENST00000559077	OSBPL3	Q9H4L5	887 aa		11.01	□□□□□ -0.65
RNF111-204	ENST00000559077		A0A1B0GTH6	734 aa		11	□□□□□ -0.65
RNF111-204	ENST00000559077	THBS1	P07996	1170 aa		11	□□□□□ -0.65
RNF111-204	ENST00000559077	MCCD1	P59942	119 aa	Predicted RBP	11	□□□□□ -0.65
RNF111-204	ENST00000559077	EFHC2	Q5JST6	749 aa		11	□□□□□ -0.65
RNF111-204	ENST00000559077	GNAS	Q5JWF2	1037 aa		11	□□□□□ -0.65
RNF111-204	ENST00000559077	ABHD17A	Q96GS6	310 aa		11	□□□□□ -0.65
RNF111-204	ENST00000559077	PRDM11	Q9NQV5	511 aa		11	□□□□□ -0.65
RNF111-204	ENST00000559077	PEAK1	Q9H792	1746 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	COL14A1	Q05707	1796 aa	Known RBP	10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	APBB1	O00213	710 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	TRAK2	O60296	914 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	IL13	P35225	146 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	SLCO4C1	Q6ZQN7	724 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	FAM9B	Q8IZU0	186 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	KIAA0232	Q92628	1395 aa		10.99	□□□□□ -0.65
RNF111-204	ENST00000559077	KRTAP9-6	A0A140TA67	174 aa		10.98	□□□□□ -0.65
RNF111-204	ENST00000559077	EIF4A2	Q14240	407 aa	Known RBP	10.98	□□□□□ -0.65

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