RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ZNRF3Q9ULT6 936 aa9.15□□□□□ -0.94
SPTLC2-206ENST00000557566 SIPA1L3O60292 1781 aaPredicted RBP9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 H7C1D1 291 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 PPEF1O14829 653 aaPredicted RBP9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 TNIP1Q15025 636 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 KRT26Q7Z3Y9 468 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 FMNL2Q96PY5 1086 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 PAPPA2Q9BXP8 1791 aa9.14□□□□□ -0.95
SPTLC2-206ENST00000557566 KIF7Q2M1P5 1343 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 IRF6O14896 467 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 TRIM66O15016 1216 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 COL9A1P20849 921 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 HOXA10P31260 410 aaPredicted RBP9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 TEFQ10587 303 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 INTS3Q68E01 1043 aaKnown RBP9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 DLK2Q6UY11 383 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 SUPT20HQ8NEM7 779 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 NYXQ9GZU5 481 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 CNOT7Q9UIV1 285 aaKnown RBP9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 RIC1Q4ADV7 1423 aa9.13□□□□□ -0.95
SPTLC2-206ENST00000557566 RANBP2P49792 3224 aaKnown RBP9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 TCERG1O14776 1098 aaKnown RBP9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 IL13P35225 146 aa9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 MTHFSDQ2M296 383 aaKnown RBP9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 NOM1Q5C9Z4 860 aaKnown RBP9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 DCPSQ96C86 337 aaKnown RBP9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 RBM17Q96I25 401 aaKnown RBP9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 ABCC12Q96J65 1359 aa9.12□□□□□ -0.95
SPTLC2-206ENST00000557566 GPR25O00155 361 aa9.11□□□□□ -0.95
SPTLC2-206ENST00000557566 RAD17O75943 681 aa9.11□□□□□ -0.95
SPTLC2-206ENST00000557566 TBC1D8O95759 1140 aa9.11□□□□□ -0.95
SPTLC2-206ENST00000557566 PIP4K2AP48426 406 aaPredicted RBP9.11□□□□□ -0.95
SPTLC2-206ENST00000557566 RASAL3Q86YV0 1011 aa9.11□□□□□ -0.95
SPTLC2-206ENST00000557566 CRAMP1Q96RY5 1269 aa9.11□□□□□ -0.95
SPTLC2-206ENST00000557566 NUP98P52948 1817 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 SHTN1A0MZ66 631 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 ADM5C9JUS6 153 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 FKTNO75072 461 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 PROX2Q3B8N5 592 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 NUTM1Q86Y26 1132 aa9.1□□□□□ -0.95
SPTLC2-206ENST00000557566 HMOX1P09601 288 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 FECHP22830 423 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 KIAA2012Q0VF49 1180 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 TBC1D10BQ4KMP7 808 aaPredicted RBP9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 SLC51AQ86UW1 340 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 DPF2Q92785 391 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 RTFDC1Q9BY42 306 aaPredicted RBP9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 ATP6V0A2Q9Y487 856 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 USP16Q9Y5T5 823 aa9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 IBTKQ9P2D0 1353 aaPredicted RBP9.09□□□□□ -0.95
SPTLC2-206ENST00000557566 FKBP1BP68106 108 aa9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 PDE4DQ08499 809 aa9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 HLFQ16534 295 aa9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 AMHR2Q16671 573 aa9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 DPP8Q6V1X1 898 aaPredicted RBP9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 MORC1Q86VD1 984 aa9.08□□□□□ -0.96
SPTLC2-206ENST00000557566 PRAMEF22A3QJZ6 481 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 BTBD11A6QL63 1104 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 GNAT3A8MTJ3 354 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 TM4SF4P48230 202 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 IL17REQ8NFR9 667 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 CDCA5Q96FF9 252 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 ZBED2Q9BTP6 218 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 RBM27Q9P2N5 1060 aaKnown RBP9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 TRIM17Q9Y577 477 aa9.07□□□□□ -0.96
SPTLC2-206ENST00000557566 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 YDJCA8MPS7 323 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 EGFRP00533 1210 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 SNRPA1P09661 255 aaKnown RBP9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 RPS12P25398 132 aaKnown RBP9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 SREBF2Q12772 1141 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 MPNDQ8N594 471 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 POLR3GLQ9BT43 218 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 CFHR5Q9BXR6 569 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
SPTLC2-206ENST00000557566 DDX60Q8IY21 1712 aaKnown RBP9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 NBPF26B4DH59 902 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 PSMD14O00487 310 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 KCNQ3O43525 872 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 PRSS12P56730 875 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 KIF4BQ2VIQ3 1234 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 NBPF10Q6P3W6 841 aaKnown RBP9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 NLRP3Q96P20 1036 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 ABCC4O15439 1325 aa9.05□□□□□ -0.96
SPTLC2-206ENST00000557566 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 CEMIPQ8WUJ3 1361 aa9.04□□□□□ -0.96
SPTLC2-206ENST00000557566 TRIM6-TRIM34B2RNG4 842 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms