RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 ATP5J2-PTCD1G3V325 749 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 KCNA3P22001 575 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 VASH1Q7L8A9 365 aaPredicted RBP9.48□□□□□ -0.89
LINC00640-204ENST00000557295 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 PLEKHM2Q8IWE5 1019 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 USHBP1Q8N6Y0 703 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 DCAF5Q96JK2 942 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 NOD1Q9Y239 953 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 C4BP0C0L5 1744 aa9.48□□□□□ -0.89
LINC00640-204ENST00000557295 ATG7O95352 703 aa9.47□□□□□ -0.89
LINC00640-204ENST00000557295 FBLN1P23142 703 aa9.47□□□□□ -0.89
LINC00640-204ENST00000557295 TMF1P82094 1093 aa9.47□□□□□ -0.89
LINC00640-204ENST00000557295 ITPK1Q13572 414 aa9.47□□□□□ -0.89
LINC00640-204ENST00000557295 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
LINC00640-204ENST00000557295 USTQ9Y2C2 406 aa9.47□□□□□ -0.89
LINC00640-204ENST00000557295 SMG6Q86US8 1419 aaKnown RBP9.47□□□□□ -0.89
LINC00640-204ENST00000557295 KCPQ6ZWJ8 1503 aa9.46□□□□□ -0.89
LINC00640-204ENST00000557295 TOGARAM1Q9Y4F4 1720 aa9.46□□□□□ -0.89
LINC00640-204ENST00000557295 ATP1A2P50993 1020 aa9.46□□□□□ -0.9
LINC00640-204ENST00000557295 TRIM26Q12899 539 aaPredicted RBP9.46□□□□□ -0.9
LINC00640-204ENST00000557295 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
LINC00640-204ENST00000557295 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
LINC00640-204ENST00000557295 RNF181Q9P0P0 153 aa9.46□□□□□ -0.9
LINC00640-204ENST00000557295 PIM2Q9P1W9 311 aa9.46□□□□□ -0.9
LINC00640-204ENST00000557295 NRG2O14511 850 aaPredicted RBP9.45□□□□□ -0.9
LINC00640-204ENST00000557295 SLC19A1P41440 591 aa9.45□□□□□ -0.9
LINC00640-204ENST00000557295 USP4Q13107 963 aa9.45□□□□□ -0.9
LINC00640-204ENST00000557295 DALRD3Q5D0E6 543 aaKnown RBP9.45□□□□□ -0.9
LINC00640-204ENST00000557295 EMID1Q96A84 441 aaPredicted RBP9.45□□□□□ -0.9
LINC00640-204ENST00000557295 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
LINC00640-204ENST00000557295 RTCBQ9Y3I0 505 aaKnown RBP9.45□□□□□ -0.9
LINC00640-204ENST00000557295 PCDHB11Q9Y5F2 797 aa9.45□□□□□ -0.9
LINC00640-204ENST00000557295 INSRP06213 1382 aa9.45□□□□□ -0.9
LINC00640-204ENST00000557295 LTN1O94822 1766 aa9.45□□□□□ -0.9
LINC00640-204ENST00000557295 MYCP01106 439 aaPredicted RBP9.44□□□□□ -0.9
LINC00640-204ENST00000557295 GYS1P13807 737 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 VEGFAP15692 232 aaPredicted RBP9.44□□□□□ -0.9
LINC00640-204ENST00000557295 RRS1Q15050 365 aaKnown RBP9.44□□□□□ -0.9
LINC00640-204ENST00000557295 HSP90AB2PQ58FF8 381 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 RC3H1Q5TC82 1133 aaKnown RBP9.44□□□□□ -0.9
LINC00640-204ENST00000557295 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
LINC00640-204ENST00000557295 PHTF2Q8N3S3 785 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 ASAP1Q9ULH1 1129 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 NOVA2Q9UNW9 492 aaKnown RBP9.44□□□□□ -0.9
LINC00640-204ENST00000557295 PARP3Q9Y6F1 533 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 KIF24Q5T7B8 1368 aa9.44□□□□□ -0.9
LINC00640-204ENST00000557295 FAM200AQ8TCP9 573 aa9.43□□□□□ -0.9
LINC00640-204ENST00000557295 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
LINC00640-204ENST00000557295 KDRP35968 1356 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 PATL2C9JE40 543 aaKnown RBP9.42□□□□□ -0.9
LINC00640-204ENST00000557295 OGFOD1Q8N543 542 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 ZNF594Q96JF6 807 aaPredicted RBP9.42□□□□□ -0.9
LINC00640-204ENST00000557295 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 PRDM10Q9NQV6 1147 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
LINC00640-204ENST00000557295 SPG7Q9UQ90 795 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 KIAA1551Q9HCM1 1747 aa9.42□□□□□ -0.9
LINC00640-204ENST00000557295 KDM6AO15550 1401 aaPredicted RBP9.41□□□□□ -0.9
LINC00640-204ENST00000557295 NCAPD2Q15021 1401 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 FLT4P35916 1363 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 CNTNAP4Q9C0A0 1308 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 GLTPD2A6NH11 291 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 FAM196BA6NMK8 535 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 FYB1O15117 783 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 RPS6KA4O75676 772 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 RFC4P35249 363 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 TSGA10IPQ3SY00 556 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 SPRYD7Q5W111 196 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
LINC00640-204ENST00000557295 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L15C9J2P7 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L12C9JPN9 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L11C9JVI0 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L21D6R901 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L18D6R9N7 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L22D6RA61 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L19D6RCP7 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L20D6RJB6 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 LMNB1P20700 586 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 SKOR1P84550 965 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 USP17L24Q0WX57 530 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 LIAT1Q6ZQX7 453 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.9
LINC00640-204ENST00000557295 UBR3Q6ZT12 1888 aa9.4□□□□□ -0.91
LINC00640-204ENST00000557295 TONSLQ96HA7 1378 aa9.39□□□□□ -0.91
LINC00640-204ENST00000557295 LCE2BO14633 110 aa9.39□□□□□ -0.91
LINC00640-204ENST00000557295 FOXN1O15353 648 aa9.39□□□□□ -0.91
LINC00640-204ENST00000557295 PHKG2P15735 406 aa9.39□□□□□ -0.91
LINC00640-204ENST00000557295 CHRNA5P30532 468 aa9.39□□□□□ -0.91
LINC00640-204ENST00000557295 GTF2IP78347 998 aa9.39□□□□□ -0.91
LINC00640-204ENST00000557295 DHX9Q08211 1270 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms