RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 SEMA3FQ13275 785 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 ARSIQ5FYB1 569 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 CCDC24Q8N4L8 307 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 RNF181Q9P0P0 153 aa12.78□□□□□ -0.36
HNRNPC-228ENST00000557033 SBF1O95248 1867 aa12.77□□□□□ -0.37
HNRNPC-228ENST00000557033 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
HNRNPC-228ENST00000557033 LMNB1P20700 586 aa12.77□□□□□ -0.37
HNRNPC-228ENST00000557033 TBC1D9Q6ZT07 1266 aa12.77□□□□□ -0.37
HNRNPC-228ENST00000557033 NYXQ9GZU5 481 aa12.77□□□□□ -0.37
HNRNPC-228ENST00000557033 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
HNRNPC-228ENST00000557033 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 NPR1P16066 1061 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 GTF2E1P29083 439 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 HLA-CQ95604 372 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
HNRNPC-228ENST00000557033 CFAP99D6REC4 459 aa12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 C21orf2O43822 256 aa12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 GABBR2O75899 941 aa12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 NUP98P52948 1817 aa12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 LRP10Q7Z4F1 713 aa12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 TSC1Q92574 1164 aa12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 LAS1LQ9Y4W2 734 aaKnown RBP12.75□□□□□ -0.37
HNRNPC-228ENST00000557033 TOMM70O94826 608 aa12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 HOXB7P09629 217 aa12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 ALDH1B1P30837 517 aa12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 RASSF7Q02833 373 aa12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 CALD1Q05682 793 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 ZNF34Q8IZ26 560 aa12.74□□□□□ -0.37
HNRNPC-228ENST00000557033 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 NFKBIEO00221 500 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 APAF1O14727 1248 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 ATP9BO43861 1147 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 ELOAQ14241 798 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 PARP10Q53GL7 1025 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 C7orf43Q8WVR3 580 aa12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 COL11A2P13942 1736 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-228ENST00000557033 IBTKQ9P2D0 1353 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 SMAPO00193 183 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 PTPREP23469 700 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 PRELPP51888 382 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 HSP90AB3PQ58FF7 597 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 SUSD4Q5VX71 490 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 COPS6Q7L5N1 327 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
HNRNPC-228ENST00000557033 SLC10A3P09131 477 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 ZNF853P0CG23 659 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 GPTP24298 496 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 GNAI1P63096 354 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 PROSER3Q2NL68 480 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 CRY2Q49AN0 593 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 ERFEQ4G0M1 354 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 C16orf71Q8IYS4 520 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 IFT57Q9NWB7 429 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 DBF4Q9UBU7 674 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 LHX6Q9UPM6 363 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 FER1L6Q2WGJ9 1857 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 CCDC88AQ3V6T2 1871 aa12.71□□□□□ -0.37
HNRNPC-228ENST00000557033 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.38
HNRNPC-228ENST00000557033 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
HNRNPC-228ENST00000557033 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 RBM47A0AV96 593 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 HSPA6P17066 643 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 NR6A1Q15406 480 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 KRT24Q2M2I5 525 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 CHMP4AQ9BY43 222 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
HNRNPC-228ENST00000557033 RNF123Q5XPI4 1314 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 ANP32CO43423 234 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 NTSR2O95665 410 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 ANXA1P04083 346 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 DUSP27Q5VZP5 1158 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
HNRNPC-228ENST00000557033 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms