RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
SIX1-205ENST00000555955 PTH1RQ03431 593 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
SIX1-205ENST00000555955 MSL3Q8N5Y2 521 aaKnown RBP16.83■□□□□ 0.28
SIX1-205ENST00000555955 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 DDX11Q96FC9 970 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 C14orf93Q9H972 538 aaKnown RBP16.83■□□□□ 0.28
SIX1-205ENST00000555955 PPP2R2CQ9Y2T4 447 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 ADGRB3O60242 1522 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 ABCB6Q9NP58 842 aa16.83■□□□□ 0.28
SIX1-205ENST00000555955 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 ECM2O94769 699 aaPredicted RBP16.82■□□□□ 0.28
SIX1-205ENST00000555955 CHMP4BP1P59074 171 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 SEMA3FQ13275 785 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 ANKZF1Q9H8Y5 726 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 SLC24A3Q9HC58 644 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 SETBP1Q9Y6X0 1596 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 CCT4P50991 539 aaKnown RBP16.82■□□□□ 0.28
SIX1-205ENST00000555955 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
SIX1-205ENST00000555955 CASP8Q14790 479 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
SIX1-205ENST00000555955 HSP90B1P14625 803 aaKnown RBP16.81■□□□□ 0.28
SIX1-205ENST00000555955 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
SIX1-205ENST00000555955 USP5P45974 858 aa16.81■□□□□ 0.28
SIX1-205ENST00000555955 NBPF20Q3BBV1 942 aa16.81■□□□□ 0.28
SIX1-205ENST00000555955 TERF2IPQ9NYB0 399 aa16.81■□□□□ 0.28
SIX1-205ENST00000555955 DPCR1Q3MIW9 517 aa16.81■□□□□ 0.28
SIX1-205ENST00000555955 CLIC6Q96NY7 704 aa16.81■□□□□ 0.28
SIX1-205ENST00000555955 PNKPQ96T60 521 aa16.81■□□□□ 0.28
SIX1-205ENST00000555955 IBSPP21815 317 aaPredicted RBP16.8■□□□□ 0.28
SIX1-205ENST00000555955 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 RESTQ13127 1097 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 STK3Q13188 491 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 MAP9Q49MG5 647 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 TTC19Q6DKK2 380 aaPredicted RBP16.8■□□□□ 0.28
SIX1-205ENST00000555955 ZNF526Q8TF50 670 aaPredicted RBP16.8■□□□□ 0.28
SIX1-205ENST00000555955 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 GNL3LQ9NVN8 582 aaKnown RBP16.8■□□□□ 0.28
SIX1-205ENST00000555955 GOLGA8FQ08AF8 430 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 GOLGA8DPQ0D2H9 430 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 PI4K2BQ8TCG2 481 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 CALR3Q96L12 384 aaKnown RBP16.8■□□□□ 0.28
SIX1-205ENST00000555955 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
SIX1-205ENST00000555955 RAB21Q9UL25 225 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
SIX1-205ENST00000555955 LMOD1P29536 600 aaPredicted RBP16.79■□□□□ 0.28
SIX1-205ENST00000555955 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 FAM169AQ9Y6X4 670 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 C3P01024 1663 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 H3BQV1 296 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
SIX1-205ENST00000555955 IFFO2Q5TF58 517 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 SRGAP1Q7Z6B7 1085 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 AFAP1L1Q8TED9 768 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 CCDC12Q8WUD4 166 aaPredicted RBP16.79■□□□□ 0.28
SIX1-205ENST00000555955 KIFC2Q96AC6 838 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 MIEF2Q96C03 454 aa16.79■□□□□ 0.28
SIX1-205ENST00000555955 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
SIX1-205ENST00000555955 GOLGA6L9A6NEM1 432 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 POTEB2H3BUK9 544 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 C21orf2O43822 256 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 CALRP27797 417 aaKnown RBP16.78■□□□□ 0.28
SIX1-205ENST00000555955 FANCCQ00597 558 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 SCRN1Q12765 414 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 CPLX2Q6PUV4 134 aaKnown RBP16.78■□□□□ 0.28
SIX1-205ENST00000555955 ENGASEQ8NFI3 743 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 TACO1Q9BSH4 297 aaKnown RBP16.78■□□□□ 0.28
SIX1-205ENST00000555955 ACBD3Q9H3P7 528 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 EBAG9O00559 213 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 ARHGAP6O43182 974 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 CCT5P48643 541 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 COL9A3Q14050 684 aaPredicted RBP16.78■□□□□ 0.28
SIX1-205ENST00000555955 G2E3Q7L622 706 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
SIX1-205ENST00000555955 ADGRB1O14514 1584 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 RNF40O75150 1001 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 NAIF1Q69YI7 327 aaPredicted RBP16.78■□□□□ 0.28
SIX1-205ENST00000555955 GGT6Q6P531 493 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 FSIP1Q8NA03 581 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 BRF1Q92994 677 aa16.78■□□□□ 0.28
SIX1-205ENST00000555955 NEBLO76041 1014 aa16.77■□□□□ 0.28
SIX1-205ENST00000555955 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
SIX1-205ENST00000555955 CUTAO60888 179 aa16.77■□□□□ 0.27
SIX1-205ENST00000555955 NEDD9Q14511 834 aa16.77■□□□□ 0.27
SIX1-205ENST00000555955 A1CFQ9NQ94 594 aaKnown RBP16.77■□□□□ 0.27
SIX1-205ENST00000555955 RCOR1Q9UKL0 485 aa16.77■□□□□ 0.27
SIX1-205ENST00000555955 SH3BP1Q9Y3L3 701 aa16.77■□□□□ 0.27
SIX1-205ENST00000555955 JAK2O60674 1132 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 ELF1P32519 619 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 MSANTD4Q8NCY6 345 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 PPLO60437 1756 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 RHOXF2BP0C7M4 288 aa16.76■□□□□ 0.27
SIX1-205ENST00000555955 ATP1A3P13637 1013 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms