RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DDX11L8A8MPP1 907 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 GPR25O00155 361 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 TRIM27P14373 513 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 GPTP24298 496 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 SP8Q8IXZ3 490 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 C8orf58Q8NAV2 365 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 SNX21Q969T3 373 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 CDCA5Q96FF9 252 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 NLRP3Q96P20 1036 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 ZBTB40Q9NUA8 1239 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
SRP54-205ENST00000554803 PSMD14O00487 310 aa13.69□□□□□ -0.22
SRP54-205ENST00000554803 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
SRP54-205ENST00000554803 RBM25P49756 843 aaKnown RBP13.69□□□□□ -0.22
SRP54-205ENST00000554803 C22orf23Q9BZE7 217 aa13.69□□□□□ -0.22
SRP54-205ENST00000554803 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 ELL2O00472 640 aaPredicted RBP13.68□□□□□ -0.22
SRP54-205ENST00000554803 DLL1O00548 723 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 BBOX1O75936 387 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
SRP54-205ENST00000554803 FKBP1BP68106 108 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 SULF1Q8IWU6 871 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 TBC1D2Q9BYX2 928 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 CACNA1FO60840 1977 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 LAMB1P07942 1786 aa13.68□□□□□ -0.22
SRP54-205ENST00000554803 FKTNO75072 461 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 TM4SF4P48230 202 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 NUCB1Q02818 461 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 BMP2KLQ5H9B9 411 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 RBM26Q5T8P6 1007 aaKnown RBP13.67□□□□□ -0.22
SRP54-205ENST00000554803 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
SRP54-205ENST00000554803 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 HSCBQ8IWL3 235 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 CFHR5Q9BXR6 569 aa13.67□□□□□ -0.22
SRP54-205ENST00000554803 COLQQ9Y215 455 aaPredicted RBP13.67□□□□□ -0.22
SRP54-205ENST00000554803 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
SRP54-205ENST00000554803 KIF4BQ2VIQ3 1234 aa13.66□□□□□ -0.22
SRP54-205ENST00000554803 TWISTNBQ3B726 338 aaPredicted RBP13.66□□□□□ -0.22
SRP54-205ENST00000554803 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
SRP54-205ENST00000554803 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
SRP54-205ENST00000554803 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
SRP54-205ENST00000554803 VAMP4O75379 141 aa13.65□□□□□ -0.22
SRP54-205ENST00000554803 SEC24BO95487 1268 aa13.65□□□□□ -0.22
SRP54-205ENST00000554803 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
SRP54-205ENST00000554803 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
SRP54-205ENST00000554803 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
SRP54-205ENST00000554803 ASTN2O75129 1339 aaPredicted RBP13.64□□□□□ -0.23
SRP54-205ENST00000554803 COL6A3P12111 3177 aa13.64□□□□□ -0.23
SRP54-205ENST00000554803 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
SRP54-205ENST00000554803 SKOR2Q2VWA4 1001 aaPredicted RBP13.64□□□□□ -0.23
SRP54-205ENST00000554803 API5Q9BZZ5 524 aaKnown RBP13.64□□□□□ -0.23
SRP54-205ENST00000554803 DBNDD1Q9H9R9 158 aa13.64□□□□□ -0.23
SRP54-205ENST00000554803 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
SRP54-205ENST00000554803 MCM4P33991 863 aa13.63□□□□□ -0.23
SRP54-205ENST00000554803 GRAPQ13588 217 aa13.63□□□□□ -0.23
SRP54-205ENST00000554803 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
SRP54-205ENST00000554803 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
SRP54-205ENST00000554803 MOB2Q70IA6 237 aa13.62□□□□□ -0.23
SRP54-205ENST00000554803 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
SRP54-205ENST00000554803 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
SRP54-205ENST00000554803 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
SRP54-205ENST00000554803 UTP14AQ9BVJ6 771 aaKnown RBP13.62□□□□□ -0.23
SRP54-205ENST00000554803 R3HDMLQ9H3Y0 253 aa13.62□□□□□ -0.23
SRP54-205ENST00000554803 ECE2O60344 883 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 SREBF2Q12772 1141 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 ANGEL2Q5VTE6 544 aaKnown RBP13.61□□□□□ -0.23
SRP54-205ENST00000554803 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
SRP54-205ENST00000554803 OTOP1Q7RTM1 612 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 GBP4Q96PP9 640 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 KCNQ5Q9NR82 932 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 ZNF609O15014 1411 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
SRP54-205ENST00000554803 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
SRP54-205ENST00000554803 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
SRP54-205ENST00000554803 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
SRP54-205ENST00000554803 MYL6BP14649 208 aa13.6□□□□□ -0.23
SRP54-205ENST00000554803 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
SRP54-205ENST00000554803 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
SRP54-205ENST00000554803 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
SRP54-205ENST00000554803 MRE11P49959 708 aa13.59□□□□□ -0.23
SRP54-205ENST00000554803 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
SRP54-205ENST00000554803 SCARF1Q14162 830 aa13.59□□□□□ -0.23
SRP54-205ENST00000554803 ARMC5Q96C12 935 aa13.59□□□□□ -0.23
SRP54-205ENST00000554803 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
SRP54-205ENST00000554803 ALDH1A1P00352 501 aa13.58□□□□□ -0.24
SRP54-205ENST00000554803 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
SRP54-205ENST00000554803 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
SRP54-205ENST00000554803 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
SRP54-205ENST00000554803 SLKQ9H2G2 1235 aaPredicted RBP13.58□□□□□ -0.24
SRP54-205ENST00000554803 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms