RNA–Protein interactions for RNA: ENST00000553500.5

RPGRIP1-203, Transcript of RPGR interacting protein 1, humanhuman

TSL 4

Gene RPGRIP1, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-203ENST00000553500 PRR20DP86480 221 aa8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 PRR20BP86481 221 aa8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 PRR20AP86496 221 aa8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 INTS6LQ5JSJ4 861 aaKnown RBP8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 KANK4Q5T7N3 995 aaPredicted RBP8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 CCDC85AQ96PX6 553 aaPredicted RBP8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 ABT1Q9ULW3 272 aaKnown RBP8.03□□□□□ -1.12
RPGRIP1-203ENST00000553500 DHX9Q08211 1270 aaKnown RBP8.02□□□□□ -1.13
RPGRIP1-203ENST00000553500 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
RPGRIP1-203ENST00000553500 PRAM1Q96QH2 718 aa8.02□□□□□ -1.13
RPGRIP1-203ENST00000553500 TLL2Q9Y6L7 1015 aa8.02□□□□□ -1.13
RPGRIP1-203ENST00000553500 ELOAQ14241 798 aaKnown RBP8.01□□□□□ -1.13
RPGRIP1-203ENST00000553500 EML3Q32P44 896 aa8.01□□□□□ -1.13
RPGRIP1-203ENST00000553500 SNIP1Q8TAD8 396 aaKnown RBP8.01□□□□□ -1.13
RPGRIP1-203ENST00000553500 ZIC5Q96T25 663 aa8.01□□□□□ -1.13
RPGRIP1-203ENST00000553500 DOLKQ9UPQ8 538 aa8.01□□□□□ -1.13
RPGRIP1-203ENST00000553500 NUP155O75694 1391 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 ATP5J2-PTCD1G3V325 749 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 ATG7O95352 703 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 FSHRP23945 695 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 CHRNA5P30532 468 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 NCOA4Q13772 614 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 SIRT1Q96EB6 747 aa8□□□□□ -1.13
RPGRIP1-203ENST00000553500 CPSF1Q10570 1443 aaKnown RBP8□□□□□ -1.13
RPGRIP1-203ENST00000553500 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 DDNO94850 711 aaPredicted RBP7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 LMNB1P20700 586 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 TRIM67Q6ZTA4 783 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 LDHDQ86WU2 507 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 SYTL4Q96C24 671 aaPredicted RBP7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 TOR4AQ9NXH8 423 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 PAPPA2Q9BXP8 1791 aa7.99□□□□□ -1.13
RPGRIP1-203ENST00000553500 ANKRD36BQ8N2N9 1353 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 DICER1Q9UPY3 1922 aaKnown RBP7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 PIK3C2GO75747 1445 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 ERVH48-1M5A8F1 160 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 NFKBIEO00221 500 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 ERVK-9P63128 1117 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 USP4Q13107 963 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 MAP1SQ66K74 1059 aaPredicted RBP7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 CIAPIN1Q6FI81 312 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 CCDC116Q8IYX3 515 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 ABTB2Q8N961 1025 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 BRCA2P51587 3418 aa7.98□□□□□ -1.13
RPGRIP1-203ENST00000553500 RANBP2P49792 3224 aaKnown RBP7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 SOX1O00570 391 aaPredicted RBP7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 ARID5BQ14865 1188 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 TRIM50Q86XT4 487 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 TAF1DQ9H5J8 278 aaPredicted RBP7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 PIM2Q9P1W9 311 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 NOD1Q9Y239 953 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 PCDHB11Q9Y5F2 797 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 CCDC7Q96M83 1385 aa7.97□□□□□ -1.13
RPGRIP1-203ENST00000553500 NSD3Q9BZ95 1437 aa7.96□□□□□ -1.13
RPGRIP1-203ENST00000553500 RFX1P22670 979 aa7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 ATP1A2P50993 1020 aa7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 FOXC1Q12948 553 aa7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 ERBB4Q15303 1308 aa7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 POLR3AO14802 1390 aaPredicted RBP7.96□□□□□ -1.14
RPGRIP1-203ENST00000553500 DLEC1Q9Y238 1755 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 SCN4AP35499 1836 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 ALDH1A1P00352 501 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 NR3C2P08235 984 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 CSB-PGBD3P0DP91 1061 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 PDE4CQ08493 712 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 PPP1R26Q5T8A7 1209 aaPredicted RBP7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 CYP4X1Q8N118 509 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 DEPDC4Q8N2C3 294 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 FAM122AQ96E09 287 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 USTQ9Y2C2 406 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 ACEP12821 1306 aa7.95□□□□□ -1.14
RPGRIP1-203ENST00000553500 MAP2P11137 1827 aaKnown RBP7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 TRPM7Q96QT4 1865 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 CA12O43570 354 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 MYCP01106 439 aaPredicted RBP7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 ECE1P42892 770 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 PTK7Q13308 1070 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 NNTQ13423 1086 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 CST9Q5W186 159 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 SIX5Q8N196 739 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 KLF16Q9BXK1 252 aaPredicted RBP7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 PGPEP1Q9NXJ5 209 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 WASF2Q9Y6W5 498 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 RPGRIP1LQ68CZ1 1315 aa7.94□□□□□ -1.14
RPGRIP1-203ENST00000553500 RBBP6Q7Z6E9 1792 aaKnown RBP7.93□□□□□ -1.14
RPGRIP1-203ENST00000553500 USP17L15C9J2P7 530 aa7.93□□□□□ -1.14
RPGRIP1-203ENST00000553500 USP17L10C9JJH3 530 aa7.93□□□□□ -1.14
RPGRIP1-203ENST00000553500 USP17L13C9JLJ4 530 aa7.93□□□□□ -1.14
RPGRIP1-203ENST00000553500 USP17L12C9JPN9 530 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms