RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 HTTP42858 3142 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 USP17L3A6NCW0 530 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 USP17L4A6NCW7 530 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
LETMD1-236ENST00000553043 SASH1O94885 1247 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 CNGB1Q14028 1251 aaPredicted RBP8.91□□□□□ -0.98
LETMD1-236ENST00000553043 USP17L1Q7RTZ2 530 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 OGFOD1Q8N543 542 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 MXD3Q9BW11 206 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 MTMR10Q9NXD2 777 aa8.91□□□□□ -0.98
LETMD1-236ENST00000553043 NUP98P52948 1817 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 EVI5O60447 810 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 ANXA1P04083 346 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 COL9A1P20849 921 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 GJA5P36382 358 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 EIF4A1P60842 406 aaKnown RBP8.9□□□□□ -0.98
LETMD1-236ENST00000553043 RPS8P62241 208 aaKnown RBP8.9□□□□□ -0.98
LETMD1-236ENST00000553043 AIMP1Q12904 312 aaKnown RBP8.9□□□□□ -0.98
LETMD1-236ENST00000553043 CC2D1BQ5T0F9 858 aaKnown RBP8.9□□□□□ -0.98
LETMD1-236ENST00000553043 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 CCER1Q8TC90 406 aaPredicted RBP8.9□□□□□ -0.98
LETMD1-236ENST00000553043 FBXW7Q969H0 707 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 PCGF6Q9BYE7 350 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 ARHGAP39Q9C0H5 1083 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 GGA1Q9UJY5 639 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 COL6A3P12111 3177 aa8.9□□□□□ -0.98
LETMD1-236ENST00000553043 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
LETMD1-236ENST00000553043 EIF2S2P20042 333 aaKnown RBP8.89□□□□□ -0.99
LETMD1-236ENST00000553043 TAF1CQ15572 869 aaPredicted RBP8.89□□□□□ -0.99
LETMD1-236ENST00000553043 HSP90AB3PQ58FF7 597 aa8.89□□□□□ -0.99
LETMD1-236ENST00000553043 GPR153Q6NV75 609 aa8.89□□□□□ -0.99
LETMD1-236ENST00000553043 UBE2Q1Q7Z7E8 422 aa8.89□□□□□ -0.99
LETMD1-236ENST00000553043 APOBEC3FQ8IUX4 373 aaKnown RBP8.89□□□□□ -0.99
LETMD1-236ENST00000553043 ZFYVE28Q9HCC9 887 aa8.89□□□□□ -0.99
LETMD1-236ENST00000553043 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
LETMD1-236ENST00000553043 GJA8P48165 433 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 KIF22Q14807 665 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
LETMD1-236ENST00000553043 MAP3K11Q16584 847 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 PROSER3Q2NL68 480 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
LETMD1-236ENST00000553043 LRP10Q7Z4F1 713 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 FAM89AQ96GI7 184 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 DEFB129Q9H1M3 183 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 PODXL2Q9NZ53 605 aa8.88□□□□□ -0.99
LETMD1-236ENST00000553043 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 CENPFP49454 3210 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 HTATSF1O43719 755 aaKnown RBP8.87□□□□□ -0.99
LETMD1-236ENST00000553043 FARP2O94887 1054 aaPredicted RBP8.87□□□□□ -0.99
LETMD1-236ENST00000553043 GJB1P08034 283 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 CCL5P13501 91 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 PDIA6Q15084 440 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 COPS6Q7L5N1 327 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 PNISRQ8TF01 805 aaKnown RBP8.87□□□□□ -0.99
LETMD1-236ENST00000553043 RNF208Q9H0X6 261 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 SEC31BQ9NQW1 1179 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 FOXD4L1Q9NU39 408 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 BIN2Q9UBW5 565 aaPredicted RBP8.87□□□□□ -0.99
LETMD1-236ENST00000553043 RAPGEFL1Q9UHV5 662 aa8.87□□□□□ -0.99
LETMD1-236ENST00000553043 TAF1P21675 1872 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 COL3A1P02461 1466 aaPredicted RBP8.86□□□□□ -0.99
LETMD1-236ENST00000553043 IREB2P48200 963 aaKnown RBP8.86□□□□□ -0.99
LETMD1-236ENST00000553043 BCAMP50895 628 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 LACTBP83111 547 aaPredicted RBP8.86□□□□□ -0.99
LETMD1-236ENST00000553043 DACT2Q5SW24 774 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 KIAA0825Q8IV33 1275 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 XAGE3Q8WTP9 111 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 U2AF1L4Q8WU68 220 aaKnown RBP8.86□□□□□ -0.99
LETMD1-236ENST00000553043 BRI3BPQ8WY22 251 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 OPTNQ96CV9 577 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 MS4A4AQ96JQ5 239 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 ELP3Q9H9T3 547 aa8.86□□□□□ -0.99
LETMD1-236ENST00000553043 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 LAMA3Q16787 3333 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 CCL15-CCL14A0A0B4J2E2 113 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 USP2O75604 605 aaPredicted RBP8.85□□□□□ -0.99
LETMD1-236ENST00000553043 U2AF1L5P0DN76 240 aaPredicted RBP8.85□□□□□ -0.99
LETMD1-236ENST00000553043 GRK4P32298 578 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 U2AF1Q01081 240 aaKnown RBP eCLIP8.85□□□□□ -0.99
LETMD1-236ENST00000553043 CCL15Q16663 113 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 LRIT3Q3SXY7 679 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 SUPT20HL1Q3ZLR7 823 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 NBPF12Q5TAG4 269 aaPredicted RBP8.85□□□□□ -0.99
LETMD1-236ENST00000553043 ANKRD13AQ8IZ07 590 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 RAET1EQ8TD07 263 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 GDF15Q99988 308 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 ZMYND8Q9ULU4 1186 aaPredicted RBP8.85□□□□□ -0.99
LETMD1-236ENST00000553043 COL4A1P02462 1669 aa8.85□□□□□ -0.99
LETMD1-236ENST00000553043 RPTORQ8N122 1335 aa8.84□□□□□ -0.99
LETMD1-236ENST00000553043 SSC5DA1L4H1 1573 aa8.84□□□□□ -0.99
LETMD1-236ENST00000553043 UNCXA6NJT0 531 aa8.84□□□□□ -0.99
LETMD1-236ENST00000553043 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
LETMD1-236ENST00000553043 IRS4O14654 1257 aaPredicted RBP8.84□□□□□ -0.99
LETMD1-236ENST00000553043 TLR2O60603 784 aa8.84□□□□□ -0.99
LETMD1-236ENST00000553043 GNRH1P01148 92 aa8.84□□□□□ -0.99
LETMD1-236ENST00000553043 BMP8BP34820 402 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms