RNA–Protein interactions for RNA: ENST00000552286.5

MTA1-220, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 1,943 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-220ENST00000552286 ANKRD18AQ8IVF6 992 aa23.59■■□□□ 1.37
MTA1-220ENST00000552286 AKAP2Q9Y2D5 859 aa23.59■■□□□ 1.37
MTA1-220ENST00000552286 VGLL2Q8N8G2 317 aa23.59■■□□□ 1.37
MTA1-220ENST00000552286 RFX7Q2KHR2 1363 aa23.58■■□□□ 1.37
MTA1-220ENST00000552286 CYP2E1P05181 493 aaPredicted RBP23.58■■□□□ 1.37
MTA1-220ENST00000552286 NECTIN1Q15223 517 aa23.58■■□□□ 1.37
MTA1-220ENST00000552286 CLEC17AQ6ZS10 378 aa23.58■■□□□ 1.37
MTA1-220ENST00000552286 CELF1Q92879 486 aaKnown RBP23.58■■□□□ 1.37
MTA1-220ENST00000552286 MAP4K1Q92918 833 aa23.58■■□□□ 1.37
MTA1-220ENST00000552286 DNAJC2Q99543 621 aaKnown RBP23.58■■□□□ 1.37
MTA1-220ENST00000552286 MED23Q9ULK4 1368 aa23.58■■□□□ 1.36
MTA1-220ENST00000552286 PRPF40BQ6NWY9 871 aaKnown RBP23.57■■□□□ 1.36
MTA1-220ENST00000552286 DDX46Q7L014 1031 aaKnown RBP23.57■■□□□ 1.36
MTA1-220ENST00000552286 PARP3Q9Y6F1 533 aa23.57■■□□□ 1.36
MTA1-220ENST00000552286 PDE8BO95263 885 aa23.57■■□□□ 1.36
MTA1-220ENST00000552286 HELBQ8NG08 1087 aaPredicted RBP23.57■■□□□ 1.36
MTA1-220ENST00000552286 TTC14Q96N46 770 aa23.57■■□□□ 1.36
MTA1-220ENST00000552286 NDUFB9Q9Y6M9 179 aa23.57■■□□□ 1.36
MTA1-220ENST00000552286 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
MTA1-220ENST00000552286 A0A1B0GUL6 1792 aa23.56■■□□□ 1.36
MTA1-220ENST00000552286 ATP2B3Q16720 1220 aa23.56■■□□□ 1.36
MTA1-220ENST00000552286 NOL8Q76FK4 1167 aaKnown RBP23.56■■□□□ 1.36
MTA1-220ENST00000552286 INTS4Q96HW7 963 aaKnown RBP23.56■■□□□ 1.36
MTA1-220ENST00000552286 RBM8AQ9Y5S9 174 aaKnown RBP23.56■■□□□ 1.36
MTA1-220ENST00000552286 TRAK2O60296 914 aa23.55■■□□□ 1.36
MTA1-220ENST00000552286 PDGFDQ9GZP0 370 aaPredicted RBP23.55■■□□□ 1.36
MTA1-220ENST00000552286 BSDC1Q9NW68 430 aaPredicted RBP23.55■■□□□ 1.36
MTA1-220ENST00000552286 RPS8P62241 208 aaKnown RBP23.54■■□□□ 1.36
MTA1-220ENST00000552286 RPGRQ92834 1020 aaKnown RBP23.54■■□□□ 1.36
MTA1-220ENST00000552286 TM6SF1Q9BZW5 370 aa23.54■■□□□ 1.36
MTA1-220ENST00000552286 TAF5LO75529 589 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 ADORA1P30542 326 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 CHRNDQ07001 517 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 PKP1Q13835 747 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 PUM3Q15397 648 aaKnown RBP23.53■■□□□ 1.36
MTA1-220ENST00000552286 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 CREB3L3Q68CJ9 461 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 ZNF589Q86UQ0 364 aaPredicted RBP23.53■■□□□ 1.36
MTA1-220ENST00000552286 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 XAGE2Q96GT9 111 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
MTA1-220ENST00000552286 CASTP20810 708 aaKnown RBP23.53■■□□□ 1.36
MTA1-220ENST00000552286 KCNJ4P48050 445 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 KBTBD3Q8NAB2 608 aa23.53■■□□□ 1.36
MTA1-220ENST00000552286 ADCK5Q3MIX3 580 aa23.52■■□□□ 1.36
MTA1-220ENST00000552286 GORABQ5T7V8 394 aa23.52■■□□□ 1.36
MTA1-220ENST00000552286 BAG4O95429 457 aaKnown RBP23.51■■□□□ 1.35
MTA1-220ENST00000552286 PTMSP20962 102 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 AK2P54819 239 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 JAKMIP1Q96N16 626 aaKnown RBP23.51■■□□□ 1.35
MTA1-220ENST00000552286 ZSWIM6Q9HCJ5 1215 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 PAG1Q9NWQ8 432 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 GRAPQ13588 217 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 TICAM2Q86XR7 235 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 GRAPLQ8TC17 118 aaPredicted RBP23.51■■□□□ 1.35
MTA1-220ENST00000552286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.51■■□□□ 1.35
MTA1-220ENST00000552286 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
MTA1-220ENST00000552286 BRIP1Q9BX63 1249 aa23.51■■□□□ 1.35
MTA1-220ENST00000552286 SLC27A2O14975 620 aa23.5■■□□□ 1.35
MTA1-220ENST00000552286 LPIN2Q92539 896 aa23.5■■□□□ 1.35
MTA1-220ENST00000552286 MINPP1Q9UNW1 487 aa23.5■■□□□ 1.35
MTA1-220ENST00000552286 SNAP23O00161 211 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 GOLIM4O00461 696 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 IFIT1P09914 478 aaKnown RBP23.49■■□□□ 1.35
MTA1-220ENST00000552286 FGFR2P21802 821 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 ZDHHC9Q9Y397 364 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 CYP46A1Q9Y6A2 500 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 KLRG2A4D1S0 409 aaPredicted RBP23.49■■□□□ 1.35
MTA1-220ENST00000552286 CPA1P15085 419 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 CCDC158Q5M9N0 1113 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 VPS53Q5VIR6 699 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 RNF20Q5VTR2 975 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 LIMCH1Q9UPQ0 1083 aa23.49■■□□□ 1.35
MTA1-220ENST00000552286 CHGBP05060 677 aa23.48■■□□□ 1.35
MTA1-220ENST00000552286 SLC5A1P13866 664 aa23.48■■□□□ 1.35
MTA1-220ENST00000552286 MCMDC2Q4G0Z9 681 aa23.48■■□□□ 1.35
MTA1-220ENST00000552286 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
MTA1-220ENST00000552286 RUFY3Q7L099 469 aa23.48■■□□□ 1.35
MTA1-220ENST00000552286 RBM17Q96I25 401 aaKnown RBP23.48■■□□□ 1.35
MTA1-220ENST00000552286 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
MTA1-220ENST00000552286 GOLGA6L22H0YM25 854 aa23.47■■□□□ 1.35
MTA1-220ENST00000552286 PDRG1Q9NUG6 133 aa23.47■■□□□ 1.35
MTA1-220ENST00000552286 RPAP1Q9BWH6 1393 aaPredicted RBP23.47■■□□□ 1.35
MTA1-220ENST00000552286 SEC62Q99442 399 aaKnown RBP23.47■■□□□ 1.35
MTA1-220ENST00000552286 HMG20BQ9P0W2 317 aa23.46■■□□□ 1.35
MTA1-220ENST00000552286 PSMA5P28066 241 aa23.45■■□□□ 1.35
MTA1-220ENST00000552286 HOXA10P31260 410 aaPredicted RBP23.45■■□□□ 1.35
MTA1-220ENST00000552286 PDE6BP35913 854 aa23.45■■□□□ 1.35
MTA1-220ENST00000552286 SKOR2Q2VWA4 1001 aaPredicted RBP23.45■■□□□ 1.35
MTA1-220ENST00000552286 TSGA10IPQ3SY00 556 aa23.45■■□□□ 1.35
MTA1-220ENST00000552286 CCDC129Q6ZRS4 1044 aa23.45■■□□□ 1.34
MTA1-220ENST00000552286 SLC16A10Q8TF71 515 aa23.45■■□□□ 1.34
MTA1-220ENST00000552286 HELLSQ9NRZ9 838 aa23.45■■□□□ 1.34
MTA1-220ENST00000552286 BRD1O95696 1058 aa23.43■■□□□ 1.34
MTA1-220ENST00000552286 LARP6Q9BRS8 491 aaKnown RBP23.43■■□□□ 1.34
MTA1-220ENST00000552286 ANKRD2Q9GZV1 360 aa23.43■■□□□ 1.34
MTA1-220ENST00000552286 GZF1Q9H116 711 aaPredicted RBP23.43■■□□□ 1.34
MTA1-220ENST00000552286 SRGNP10124 158 aa23.43■■□□□ 1.34
MTA1-220ENST00000552286 CCDC102BQ68D86 513 aa23.43■■□□□ 1.34
MTA1-220ENST00000552286 SLC51AQ86UW1 340 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms