RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 H3BQF6 201 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 NOP2P46087 812 aaKnown RBP14.2□□□□□ -0.14
ERBB3-219ENST00000551242 KCNJ6P48051 423 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 FANCCQ00597 558 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 NCAPHQ15003 741 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 DPF2Q92785 391 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 WDR24Q96S15 920 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 SNRKQ9NRH2 765 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 COL15A1P39059 1388 aa14.2□□□□□ -0.14
ERBB3-219ENST00000551242 DHX16O60231 1041 aaKnown RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 PAXIP1Q6ZW49 1069 aaPredicted RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 SMARCC2Q8TAQ2 1214 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 SRRTQ9BXP5 876 aaKnown RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 FUT8Q9BYC5 575 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 PARD6BQ9BYG5 372 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 ARFGAP3Q9NP61 516 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 IGSF1Q8N6C5 1336 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 CASQ1P31415 396 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 TSGA10IPQ3SY00 556 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 KLHDC4Q8TBB5 520 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 ZNF396Q96N95 335 aaPredicted RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 RRP15Q9Y3B9 282 aaKnown RBP14.19□□□□□ -0.14
ERBB3-219ENST00000551242 KIF13AQ9H1H9 1805 aa14.19□□□□□ -0.14
ERBB3-219ENST00000551242 ATP8B1O43520 1251 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 KCNQ3O43525 872 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 TUBB4AP04350 444 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 APOBRQ0VD83 1088 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 MTX1Q13505 466 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 NAA16Q6N069 864 aaPredicted RBP14.18□□□□□ -0.14
ERBB3-219ENST00000551242 SRLQ86TD4 932 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 ERC1Q8IUD2 1116 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 ZSWIM4Q9H7M6 989 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 EFCC1Q9HA90 598 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 A2ML1A8K2U0 1454 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 AKAP12Q02952 1782 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 CYP21A2P08686 494 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 OTUD7BQ6GQQ9 843 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 GOLGA5Q8TBA6 731 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 AK7Q96M32 723 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 SLC26A8Q96RN1 970 aa14.18□□□□□ -0.14
ERBB3-219ENST00000551242 N4BP2Q86UW6 1770 aaPredicted RBP14.18□□□□□ -0.14
ERBB3-219ENST00000551242 NEDD4P46934 1319 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 TPM1P09493 284 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 GNG11P61952 73 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 CHMP4CQ96CF2 233 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 CWC15Q9P013 229 aaKnown RBP14.17□□□□□ -0.14
ERBB3-219ENST00000551242 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 PPP2R3AQ06190 1150 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 G3BP1Q13283 466 aaKnown RBP eCLIP14.17□□□□□ -0.143e-7■■□□□ 14.5
ERBB3-219ENST00000551242 KRT32Q14532 448 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 GPR161Q8N6U8 529 aaKnown RBP14.17□□□□□ -0.14
ERBB3-219ENST00000551242 FLT4P35916 1363 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 TMEM232C9JQI7 657 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 CCP110O43303 1012 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 SLC3A2P08195 630 aaKnown RBP14.17□□□□□ -0.14
ERBB3-219ENST00000551242 SF3A1Q15459 793 aaKnown RBP14.17□□□□□ -0.14
ERBB3-219ENST00000551242 FOXR1Q6PIV2 292 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 STOX1Q6ZVD7 989 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 USHBP1Q8N6Y0 703 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 HSD3B7Q9H2F3 369 aa14.17□□□□□ -0.14
ERBB3-219ENST00000551242 PFKFB2O60825 505 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 ALDH1L1O75891 902 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 POLR3DP05423 398 aaPredicted RBP14.16□□□□□ -0.14
ERBB3-219ENST00000551242 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 MAP3K2Q9Y2U5 619 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 CLIC4Q9Y696 253 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 SERPINC1P01008 464 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 UBASH3AP57075 661 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 LONRF2Q1L5Z9 754 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 CFAP100Q494V2 611 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 ADALQ6DHV7 355 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 EXOC4Q96A65 974 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 BPIFA3Q9BQP9 254 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 PPP2R2CQ9Y2T4 447 aa14.16□□□□□ -0.14
ERBB3-219ENST00000551242 USP31Q70CQ4 1352 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 MAP3K9P80192 1104 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 PSME1Q06323 249 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 MCM6Q14566 821 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 HSP90AA4PQ58FG1 418 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 VPS18Q9P253 973 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 ACTN2P35609 894 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 NLRP12P59046 1061 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
ERBB3-219ENST00000551242 STK38Q15208 465 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 RSRC2Q7L4I2 434 aaKnown RBP14.15□□□□□ -0.14
ERBB3-219ENST00000551242 SUCLG2Q96I99 432 aa14.15□□□□□ -0.14
ERBB3-219ENST00000551242 BICC1Q9H694 974 aaKnown RBP14.15□□□□□ -0.14
ERBB3-219ENST00000551242 ZNF202O95125 648 aa14.14□□□□□ -0.15
ERBB3-219ENST00000551242 TEFQ10587 303 aa14.14□□□□□ -0.15
ERBB3-219ENST00000551242 KAZALD1Q96I82 304 aa14.14□□□□□ -0.15
ERBB3-219ENST00000551242 LLPHQ9BRT6 129 aaKnown RBP14.14□□□□□ -0.15
ERBB3-219ENST00000551242 PDE11AQ9HCR9 933 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms