RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 NEK1Q96PY6 1258 aa17.27■□□□□ 0.36
SCN8A-207ENST00000551216 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
SCN8A-207ENST00000551216 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.36
SCN8A-207ENST00000551216 MAST3O60307 1309 aa17.27■□□□□ 0.35
SCN8A-207ENST00000551216 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
SCN8A-207ENST00000551216 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
SCN8A-207ENST00000551216 CCDC102BQ68D86 513 aa17.26■□□□□ 0.35
SCN8A-207ENST00000551216 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
SCN8A-207ENST00000551216 CYP21A2P08686 494 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 HSPA1LP34931 641 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 MCAMP43121 646 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 ZAP70P43403 619 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 FBXL16Q8N461 479 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
SCN8A-207ENST00000551216 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
SCN8A-207ENST00000551216 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 ZPR1O75312 459 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 ADRA2BP18089 450 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
SCN8A-207ENST00000551216 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 CASZ1Q86V15 1759 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 ZBTB22O15209 634 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 PKP1Q13835 747 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 SCARF1Q14162 830 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 CCDC129Q6ZRS4 1044 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
SCN8A-207ENST00000551216 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
SCN8A-207ENST00000551216 PDCP20941 246 aa17.23■□□□□ 0.35
SCN8A-207ENST00000551216 ADD2P35612 726 aa17.23■□□□□ 0.35
SCN8A-207ENST00000551216 L1TD1Q5T7N2 865 aaKnown RBP17.23■□□□□ 0.35
SCN8A-207ENST00000551216 OSBP2Q969R2 916 aa17.23■□□□□ 0.35
SCN8A-207ENST00000551216 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
SCN8A-207ENST00000551216 A0A1B0GUL6 1792 aa17.22■□□□□ 0.35
SCN8A-207ENST00000551216 LAMA4Q16363 1823 aa17.22■□□□□ 0.35
SCN8A-207ENST00000551216 ME3Q16798 604 aa17.22■□□□□ 0.35
SCN8A-207ENST00000551216 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
SCN8A-207ENST00000551216 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
SCN8A-207ENST00000551216 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
SCN8A-207ENST00000551216 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
SCN8A-207ENST00000551216 GNPATO15228 680 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 CPA1P15085 419 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 TOB2Q14106 344 aaPredicted RBP17.21■□□□□ 0.35
SCN8A-207ENST00000551216 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 ERFEQ4G0M1 354 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 TPCN1Q9ULQ1 816 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 M0R2C6 588 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 ZMYM6O95789 1325 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
SCN8A-207ENST00000551216 PHKA1P46020 1223 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 IMMTQ16891 758 aaKnown RBP17.21■□□□□ 0.35
SCN8A-207ENST00000551216 MCTP1Q6DN14 999 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 SPATA5Q8NB90 893 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.35
SCN8A-207ENST00000551216 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 STX6O43752 255 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 CHRNDQ07001 517 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 MAP3K12Q12852 859 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
SCN8A-207ENST00000551216 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 PTF1AQ7RTS3 328 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 LMBRD1Q9NUN5 540 aa17.2■□□□□ 0.34
SCN8A-207ENST00000551216 ZNF804BA4D1E1 1349 aa17.19■□□□□ 0.34
SCN8A-207ENST00000551216 IGSF3O75054 1194 aa17.19■□□□□ 0.34
SCN8A-207ENST00000551216 MBD3O95983 291 aa17.19■□□□□ 0.34
SCN8A-207ENST00000551216 ZSCAN22P10073 491 aaPredicted RBP17.19■□□□□ 0.34
SCN8A-207ENST00000551216 EXOSC10Q01780 885 aaKnown RBP17.19■□□□□ 0.34
SCN8A-207ENST00000551216 SLC9C2Q5TAH2 1124 aa17.19■□□□□ 0.34
SCN8A-207ENST00000551216 LLPHQ9BRT6 129 aaKnown RBP17.19■□□□□ 0.34
SCN8A-207ENST00000551216 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
SCN8A-207ENST00000551216 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
SCN8A-207ENST00000551216 FSD2A1L4K1 749 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 LARGE1O95461 756 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 CHGBP05060 677 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 SYT1P21579 422 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
SCN8A-207ENST00000551216 CCDC83Q8IWF9 413 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 TAF6LQ9Y6J9 622 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 E7EWF7 191 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 SEMA3EO15041 775 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 GPAA1O43292 621 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 GJB2P29033 226 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 ALX1Q15699 326 aa17.18■□□□□ 0.34
SCN8A-207ENST00000551216 ARHGEF1Q92888 912 aaKnown RBP17.18■□□□□ 0.34
SCN8A-207ENST00000551216 QTRT2Q9H974 415 aaKnown RBP17.18■□□□□ 0.34
SCN8A-207ENST00000551216 CARMIL3Q8ND23 1372 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 PDS5AQ29RF7 1337 aaKnown RBP17.17■□□□□ 0.34
SCN8A-207ENST00000551216 PDE6AP16499 860 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 RFC4P35249 363 aa17.17■□□□□ 0.34
SCN8A-207ENST00000551216 EVCP57679 992 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms