RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-222	ENST00000550889	DDB1	Q16531	1140 aa		6.29	□□□□□ -1.4
ATXN2-222	ENST00000550889	EML3	Q32P44	896 aa		6.29	□□□□□ -1.4
ATXN2-222	ENST00000550889	LTV1	Q96GA3	475 aa	Predicted RBP	6.29	□□□□□ -1.4
ATXN2-222	ENST00000550889	DNMT3L	Q9UJW3	386 aa		6.29	□□□□□ -1.4
ATXN2-222	ENST00000550889	NCAPD2	Q15021	1401 aa		6.29	□□□□□ -1.4
ATXN2-222	ENST00000550889	PARD3	Q8TEW0	1356 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	THSD7A	Q9UPZ6	1657 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	BCL9	O00512	1426 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	NCOA4	Q13772	614 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	FAM196A	Q6ZSG2	479 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	NFATC2IP	Q8NCF5	419 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	NLRP3	Q96P20	1036 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	IGSF1	Q8N6C5	1336 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	ANKRD26	Q9UPS8	1709 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	LTN1	O94822	1766 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	ATP9B	O43861	1147 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	STAU1	O95793	577 aa	Known RBP	6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	GNRH1	P01148	92 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	PPP2R1A	P30153	589 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	IL13	P35225	146 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	FOXD4L5	Q5VV16	416 aa	Predicted RBP	6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	RAPGEF4	Q8WZA2	1011 aa		6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	ZNF775	Q96BV0	537 aa	Predicted RBP	6.28	□□□□□ -1.4
ATXN2-222	ENST00000550889	PEAK1	Q9H792	1746 aa		6.27	□□□□□ -1.41
ATXN2-222	ENST00000550889	DIAPH1	O60610	1272 aa	Known RBP	6.27	□□□□□ -1.41
ATXN2-222	ENST00000550889	RNF217	Q8TC41	542 aa		6.27	□□□□□ -1.41
ATXN2-222	ENST00000550889	TFIP11	Q9UBB9	837 aa	Known RBP	6.27	□□□□□ -1.41
ATXN2-222	ENST00000550889	NOD1	Q9Y239	953 aa		6.27	□□□□□ -1.41
ATXN2-222	ENST00000550889	KDR	P35968	1356 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	OVOS2	A0A0G2JMS6	1433 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	TNS2	Q63HR2	1409 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	FAM208A	Q9UK61	1670 aa	Known RBP	6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	USP17L3	A6NCW0	530 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	USP17L4	A6NCW7	530 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	TAT	P17735	454 aa	Predicted RBP	6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	CLN3	Q13286	438 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	USP17L2	Q6R6M4	530 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	USP17L1	Q7RTZ2	530 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	MARCH10	Q8NA82	808 aa	Predicted RBP	6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	ZCRB1	Q8TBF4	217 aa	Known RBP	6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	CFAP53	Q96M91	514 aa		6.26	□□□□□ -1.41
ATXN2-222	ENST00000550889	IL2RA	P01589	272 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	GTF2I	P78347	998 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	SLC27A3	Q5K4L6	730 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	PRICKLE2	Q7Z3G6	844 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	USHBP1	Q8N6Y0	703 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	CNKSR1	Q969H4	720 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	PRKRIP1	Q9H875	184 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	ETNK1	Q9HBU6	452 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	PARP4	Q9UKK3	1724 aa	Known RBP	6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	MEGF6	O75095	1541 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	PALM3	A6NDB9	673 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	LZTS3	O60299	673 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	VEGFB	P49765	207 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	RNF144A	P50876	292 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	CNGB1	Q14028	1251 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	AMOT	Q4VCS5	1084 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	SULT6B1	Q6IMI4	303 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	PPP1R12C	Q9BZL4	782 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	SPG7	Q9UQ90	795 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	NUDC	Q9Y266	331 aa		6.25	□□□□□ -1.41
ATXN2-222	ENST00000550889	MYBBP1A	Q9BQG0	1328 aa	Known RBP	6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	PCDH11X	Q9BZA7	1347 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	PCDH11Y	Q9BZA8	1340 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	RGPD5	Q99666	1765 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	MAP2	P11137	1827 aa	Known RBP	6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	GDF10	P55107	478 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	FAM182B	Q5T319	152 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	LYSMD3	Q7Z3D4	306 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	PLEKHM2	Q8IWE5	1019 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	DDX54	Q8TDD1	881 aa	Known RBP	6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	ESYT1	Q9BSJ8	1104 aa		6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	COL3A1	P02461	1466 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN2-222	ENST00000550889	CYP27B1	O15528	508 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	RHOQ	P17081	205 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	CENPC	Q03188	943 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	PTS	Q03393	145 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	SF3B2	Q13435	895 aa	Known RBP	6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	PLEKHO1	Q53GL0	409 aa	Predicted RBP	6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	AEBP1	Q8IUX7	1158 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	NXF1	Q9UBU9	619 aa	Known RBP	6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	MKRN1	Q9UHC7	482 aa	Known RBP	6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	SERTAD1	Q9UHV2	236 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	PCDHGA11	Q9Y5H2	935 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	MAFB	Q9Y5Q3	323 aa	Predicted RBP	6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	LRRC37A3	O60309	1634 aa		6.23	□□□□□ -1.41
ATXN2-222	ENST00000550889	TERT	O14746	1132 aa	Known RBP	6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	PLSCR1	O15162	318 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	TRIM37	O94972	964 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	LMOD1	P29536	600 aa	Predicted RBP	6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	GPC1	P35052	558 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	SCNN1D	P51172	638 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	TRIM50	Q86XT4	487 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	IFNL2	Q8IZJ0	200 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	XAGE2	Q96GT9	111 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	U2SURP	O15042	1029 aa	Known RBP	6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	HSP90AB1	P08238	724 aa	Known RBP	6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	PHKG2	P15735	406 aa		6.22	□□□□□ -1.41
ATXN2-222	ENST00000550889	BAG6	P46379	1132 aa		6.22	□□□□□ -1.41

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