RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 COPS6Q7L5N1 327 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 APOBEC3FQ8IUX4 373 aaKnown RBP11.03□□□□□ -0.64
TROAP-208ENST00000548817 CELF1Q92879 486 aaKnown RBP11.03□□□□□ -0.64
TROAP-208ENST00000548817 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 LAS1LQ9Y4W2 734 aaKnown RBP11.03□□□□□ -0.64
TROAP-208ENST00000548817 NR2E3Q9Y5X4 410 aa11.03□□□□□ -0.64
TROAP-208ENST00000548817 ANXA1P04083 346 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 TMPOP42166 694 aaKnown RBP11.02□□□□□ -0.65
TROAP-208ENST00000548817 MAP3K11Q16584 847 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 LRP10Q7Z4F1 713 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 PODNQ7Z5L7 613 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 OGFOD1Q8N543 542 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 XAGE3Q8WTP9 111 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 HTATIP2Q9BUP3 242 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 MYO3BQ8WXR4 1341 aa11.02□□□□□ -0.65
TROAP-208ENST00000548817 USP17L3A6NCW0 530 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 USP17L4A6NCW7 530 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 WDR43Q15061 677 aaKnown RBP eCLIP11.01□□□□□ -0.65
TROAP-208ENST00000548817 PDIA6Q15084 440 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 USP17L1Q7RTZ2 530 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 DPF3Q92784 378 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 GGA1Q9UJY5 639 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
TROAP-208ENST00000548817 PTCH2Q9Y6C5 1203 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 UNC80Q8N2C7 3258 aa11.01□□□□□ -0.65
TROAP-208ENST00000548817 TESPA1A2RU30 521 aaPredicted RBP11□□□□□ -0.65
TROAP-208ENST00000548817 WNT10BO00744 389 aa11□□□□□ -0.65
TROAP-208ENST00000548817 UFL1O94874 794 aa11□□□□□ -0.65
TROAP-208ENST00000548817 RPS8P62241 208 aaKnown RBP11□□□□□ -0.65
TROAP-208ENST00000548817 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
TROAP-208ENST00000548817 STXBP5LQ9Y2K9 1186 aa11□□□□□ -0.65
TROAP-208ENST00000548817 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
TROAP-208ENST00000548817 GNRH1P01148 92 aa10.99□□□□□ -0.65
TROAP-208ENST00000548817 PRMT2P55345 433 aa10.99□□□□□ -0.65
TROAP-208ENST00000548817 CCDC146Q8IYE0 955 aa10.99□□□□□ -0.65
TROAP-208ENST00000548817 RUNDC1Q96C34 613 aa10.99□□□□□ -0.65
TROAP-208ENST00000548817 CHL1O00533 1208 aa10.98□□□□□ -0.65
TROAP-208ENST00000548817 ZBTB7BO15156 539 aaPredicted RBP10.98□□□□□ -0.65
TROAP-208ENST00000548817 HSP90B1P14625 803 aaKnown RBP10.98□□□□□ -0.65
TROAP-208ENST00000548817 HDGFL1Q5TGJ6 251 aa10.98□□□□□ -0.65
TROAP-208ENST00000548817 UBE2Q1Q7Z7E8 422 aa10.98□□□□□ -0.65
TROAP-208ENST00000548817 PLBD2Q8NHP8 589 aa10.98□□□□□ -0.65
TROAP-208ENST00000548817 COL25A1Q9BXS0 654 aaPredicted RBP10.98□□□□□ -0.65
TROAP-208ENST00000548817 ANKIB1Q9P2G1 1089 aa10.98□□□□□ -0.65
TROAP-208ENST00000548817 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
TROAP-208ENST00000548817 PPP2R3BQ9Y5P8 575 aa10.98□□□□□ -0.65
TROAP-208ENST00000548817 SOX1O00570 391 aaPredicted RBP10.97□□□□□ -0.65
TROAP-208ENST00000548817 HOXB7P09629 217 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 CAP1Q01518 475 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 PRKG1Q13976 671 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 SHISA4Q96DD7 197 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 HYPKQ9NX55 129 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 CHPF2Q9P2E5 772 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 DBF4Q9UBU7 674 aaPredicted RBP10.97□□□□□ -0.65
TROAP-208ENST00000548817 XDHP47989 1333 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 MYBBP1AQ9BQG0 1328 aaKnown RBP10.97□□□□□ -0.65
TROAP-208ENST00000548817 COL4A1P02462 1669 aa10.97□□□□□ -0.65
TROAP-208ENST00000548817 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
TROAP-208ENST00000548817 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
TROAP-208ENST00000548817 CAPN2P17655 700 aa10.96□□□□□ -0.65
TROAP-208ENST00000548817 DDX10Q13206 875 aaKnown RBP10.96□□□□□ -0.65
TROAP-208ENST00000548817 DACT2Q5SW24 774 aa10.96□□□□□ -0.65
TROAP-208ENST00000548817 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
TROAP-208ENST00000548817 CLMNQ96JQ2 1002 aa10.96□□□□□ -0.65
TROAP-208ENST00000548817 ZFYVE28Q9HCC9 887 aa10.96□□□□□ -0.65
TROAP-208ENST00000548817 MED23Q9ULK4 1368 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 SASH1O94885 1247 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 GJA8P48165 433 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 IREB2P48200 963 aaKnown RBP10.95□□□□□ -0.66
TROAP-208ENST00000548817 KIF22Q14807 665 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 SUPT20HL1Q3ZLR7 823 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 STRIP1Q5VSL9 837 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 RIC3Q7Z5B4 369 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 ZNF428Q96B54 188 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 FAM89AQ96GI7 184 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
TROAP-208ENST00000548817 PTPN18Q99952 460 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 CHMP4AQ9BY43 222 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 DEFB129Q9H1M3 183 aa10.95□□□□□ -0.66
TROAP-208ENST00000548817 SSC5DA1L4H1 1573 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 GJB1P08034 283 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
TROAP-208ENST00000548817 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 TAF1CQ15572 869 aaPredicted RBP10.94□□□□□ -0.66
TROAP-208ENST00000548817 RTL5Q5HYW3 569 aaPredicted RBP10.94□□□□□ -0.66
TROAP-208ENST00000548817 DUSP27Q5VZP5 1158 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 ANKRD13AQ8IZ07 590 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 DEFB123Q8N688 67 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 ISCA1Q9BUE6 129 aa10.94□□□□□ -0.66
TROAP-208ENST00000548817 ZCCHC17Q9NP64 241 aaKnown RBP10.94□□□□□ -0.66
TROAP-208ENST00000548817 ECM29Q5VYK3 1845 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms