RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, human

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM106C-208	ENST00000548355	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ANKRD2	Q9GZV1	360 aa		9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SLK	Q9H2G2	1235 aa	Predicted RBP	9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ANTXR1	Q9H6X2	564 aa		9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	MINPP1	Q9UNW1	487 aa		9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	RBM8A	Q9Y5S9	174 aa	Known RBP	9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ARAP2	Q8WZ64	1704 aa		9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	TNS1	Q9HBL0	1735 aa	Known RBP	9.39	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ZKSCAN1	P17029	563 aa	Predicted RBP	9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	MCM2	P49736	904 aa		9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	PRPF40B	Q6NWY9	871 aa	Known RBP	9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	PI16	Q6UXB8	463 aa		9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	COL23A1	Q86Y22	540 aa	Predicted RBP	9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SPATA5	Q8NB90	893 aa		9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SEC62	Q99442	399 aa	Known RBP	9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	GNL3L	Q9NVN8	582 aa	Known RBP	9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SNX14	Q9Y5W7	946 aa		9.38	□□□□□ -0.91
TMEM106C-208	ENST00000548355	RGPD3	A6NKT7	1758 aa	Predicted RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	RGPD4	Q7Z3J3	1758 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	COL4A1	P02462	1669 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SNAP23	O00161	211 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	POLRMT	O00411	1230 aa	Known RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CHGB	P05060	677 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CYP2E1	P05181	493 aa	Predicted RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	BCAM	P50895	628 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	DDR1	Q08345	913 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	GRAP	Q13588	217 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	NECTIN1	Q15223	517 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	WASHC4	Q2M389	1173 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CAVIN4	Q5BKX8	364 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CREB3L3	Q68CJ9	461 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CCDC129	Q6ZRS4	1044 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	GRAPL	Q8TC17	118 aa	Predicted RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	KCNB2	Q92953	911 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	RBM17	Q96I25	401 aa	Known RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	HMG20B	Q9P0W2	317 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355		U3KPZ7	1027 aa	Predicted RBP	9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CASZ1	Q86V15	1759 aa		9.37	□□□□□ -0.91
TMEM106C-208	ENST00000548355	MAST3	O60307	1309 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SLC27A2	O14975	620 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	IDH1	O75874	414 aa	Known RBP	9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	PSMA5	P28066	241 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SF3B2	Q13435	895 aa	Known RBP	9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	RASGRF1	Q13972	1273 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	VPS37D	Q86XT2	251 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	RASEF	Q8IZ41	740 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	APPBP2	Q92624	585 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	JAKMIP1	Q96N16	626 aa	Known RBP	9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	UPF3B	Q9BZI7	483 aa	Known RBP	9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	PIH1D3	Q9NQM4	214 aa	Known RBP	9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	STK32B	Q9NY57	414 aa		9.36	□□□□□ -0.91
TMEM106C-208	ENST00000548355	PNPLA7	Q6ZV29	1317 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355		M0R2C6	588 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ADD2	P35612	726 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	GYG1	P46976	350 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	EN1	Q05925	392 aa	Predicted RBP	9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	MAP3K12	Q12852	859 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	KRT32	Q14532	448 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	UBE3C	Q15386	1083 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	EZH2	Q15910	746 aa	Known RBP	9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SLFNL1	Q499Z3	407 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CRY2	Q49AN0	593 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SLC9C2	Q5TAH2	1124 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	OSBP2	Q969R2	916 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CAMKK2	Q96RR4	588 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ANP32E	Q9BTT0	268 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	DSCC1	Q9BVC3	393 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	TM6SF1	Q9BZW5	370 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CHMP5	Q9NZZ3	219 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	PARP3	Q9Y6F1	533 aa		9.35	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ZNF804B	A4D1E1	1349 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SEMA3E	O15041	775 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	BBOX1	O75936	387 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CAST	P20810	708 aa	Known RBP	9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	BAG6	P46379	1132 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	SLC15A2	Q16348	729 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ZSWIM6	Q9HCJ5	1215 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	FOXD4L1	Q9NU39	408 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	ANKIB1	Q9P2G1	1089 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	DENND2A	Q9ULE3	1009 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	LEMD3	Q9Y2U8	911 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	CYP46A1	Q9Y6A2	500 aa		9.34	□□□□□ -0.91
TMEM106C-208	ENST00000548355	XDH	P47989	1333 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	ZNF532	Q9HCE3	1301 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355		A0A1B0GUL6	1792 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	KLRG2	A4D1S0	409 aa	Predicted RBP	9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	FRAT2	O75474	233 aa	Predicted RBP	9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	MMP10	P09238	476 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	HSPD1	P10809	573 aa	Known RBP	9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	PDE6A	P16499	860 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	HOXA10	P31260	410 aa	Predicted RBP	9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	HIBADH	P31937	336 aa	Known RBP	9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	ADCK5	Q3MIX3	580 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	TSGA10IP	Q3SY00	556 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	NOL8	Q76FK4	1167 aa	Known RBP	9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	RUFY3	Q7L099	469 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	FBXO33	Q7Z6M2	555 aa		9.33	□□□□□ -0.92
TMEM106C-208	ENST00000548355	TMX3	Q96JJ7	454 aa		9.33	□□□□□ -0.92

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