RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 ADAM19Q9H013 955 aa9.04□□□□□ -0.96
CCDC38-204ENST00000546816 SLAIN2Q9P270 581 aa9.04□□□□□ -0.96
CCDC38-204ENST00000546816 CDC25BP30305 580 aa9.03□□□□□ -0.96
CCDC38-204ENST00000546816 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
CCDC38-204ENST00000546816 POP1Q99575 1024 aaKnown RBP9.03□□□□□ -0.96
CCDC38-204ENST00000546816 SH2B1Q9NRF2 756 aaPredicted RBP9.03□□□□□ -0.96
CCDC38-204ENST00000546816 DDX3YO15523 660 aaKnown RBP9.02□□□□□ -0.97
CCDC38-204ENST00000546816 COBLO75128 1261 aa9.02□□□□□ -0.97
CCDC38-204ENST00000546816 PDE12Q6L8Q7 609 aaKnown RBP9.02□□□□□ -0.97
CCDC38-204ENST00000546816 MYRFLQ96LU7 910 aa9.02□□□□□ -0.97
CCDC38-204ENST00000546816 C7orf69Q9H7B7 122 aa9.02□□□□□ -0.97
CCDC38-204ENST00000546816 ELP3Q9H9T3 547 aa9.02□□□□□ -0.97
CCDC38-204ENST00000546816 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
CCDC38-204ENST00000546816 PTPRAP18433 802 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 NFIAQ12857 509 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 DUOXA2Q1HG44 320 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 FAM117BQ6P1L5 589 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 UBASH3BQ8TF42 649 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 UTP4Q969X6 686 aaKnown RBP9.01□□□□□ -0.97
CCDC38-204ENST00000546816 KLHDC7BQ96G42 594 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 GOLGA2P5Q9HBQ8 144 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 SEC31BQ9NQW1 1179 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 CNTN3Q9P232 1028 aa9.01□□□□□ -0.97
CCDC38-204ENST00000546816 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.01□□□□□ -0.97
CCDC38-204ENST00000546816 RNF43Q68DV7 783 aa9□□□□□ -0.97
CCDC38-204ENST00000546816 TRIM42Q8IWZ5 723 aa9□□□□□ -0.97
CCDC38-204ENST00000546816 NUDT16Q96DE0 195 aaKnown RBP9□□□□□ -0.97
CCDC38-204ENST00000546816 SALL4Q9UJQ4 1053 aa9□□□□□ -0.97
CCDC38-204ENST00000546816 HMX2A2RU54 273 aa8.99□□□□□ -0.97
CCDC38-204ENST00000546816 NFKBIEO00221 500 aa8.99□□□□□ -0.97
CCDC38-204ENST00000546816 WNT8BQ93098 351 aa8.99□□□□□ -0.97
CCDC38-204ENST00000546816 SEPT3Q9UH03 358 aa8.99□□□□□ -0.97
CCDC38-204ENST00000546816 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 H3BRJ5 948 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 SPINK2P20155 84 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 PIP4K2BP78356 416 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 XKR5Q6UX68 686 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 ATCAYQ86WG3 371 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 KANSL3Q9P2N6 904 aa8.98□□□□□ -0.97
CCDC38-204ENST00000546816 OAS3Q9Y6K5 1087 aaKnown RBP8.98□□□□□ -0.97
CCDC38-204ENST00000546816 ADAMTS4O75173 837 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 ACPPP15309 386 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 GP2P55259 537 aaKnown RBP8.97□□□□□ -0.97
CCDC38-204ENST00000546816 ZNF438Q7Z4V0 828 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 FAM20CQ8IXL6 584 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 DBNDD2Q9BQY9 259 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 KRTAP9-9Q9BYP9 154 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 KRTAP9-4Q9BYQ2 154 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 OSGEPQ9NPF4 335 aa8.97□□□□□ -0.97
CCDC38-204ENST00000546816 INTS5Q6P9B9 1019 aaKnown RBP8.96□□□□□ -0.98
CCDC38-204ENST00000546816 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.96□□□□□ -0.98
CCDC38-204ENST00000546816 CLEC10AQ8IUN9 316 aa8.96□□□□□ -0.98
CCDC38-204ENST00000546816 C1orf127Q8N9H9 656 aa8.96□□□□□ -0.98
CCDC38-204ENST00000546816 FAM83CQ9BQN1 747 aa8.96□□□□□ -0.98
CCDC38-204ENST00000546816 DZANK1Q9NVP4 752 aa8.96□□□□□ -0.98
CCDC38-204ENST00000546816 PAX4O43316 350 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 RPLP1P05386 114 aaKnown RBP8.95□□□□□ -0.98
CCDC38-204ENST00000546816 ATP2B4P23634 1241 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 PREPP48147 710 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 IRAK1P51617 712 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 ANKRD34AQ69YU3 496 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
CCDC38-204ENST00000546816 FAM177BA6PVY3 158 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 BMP3P12645 472 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 CABP4P57796 275 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 PBXIP1Q96AQ6 731 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 CHRDQ9H2X0 955 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 GGNBP2Q9H3C7 697 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 SOX13Q9UN79 622 aa8.94□□□□□ -0.98
CCDC38-204ENST00000546816 CES1P23141 567 aa8.93□□□□□ -0.98
CCDC38-204ENST00000546816 GRIK1P39086 918 aa8.93□□□□□ -0.98
CCDC38-204ENST00000546816 HELQQ8TDG4 1101 aa8.93□□□□□ -0.98
CCDC38-204ENST00000546816 EDEM1Q92611 657 aa8.93□□□□□ -0.98
CCDC38-204ENST00000546816 HHIPQ96QV1 700 aa8.93□□□□□ -0.98
CCDC38-204ENST00000546816 RNF208Q9H0X6 261 aa8.93□□□□□ -0.98
CCDC38-204ENST00000546816 PDE2AO00408 941 aaPredicted RBP8.92□□□□□ -0.98
CCDC38-204ENST00000546816 SART1O43290 800 aaKnown RBP8.92□□□□□ -0.98
CCDC38-204ENST00000546816 TRPA1O75762 1119 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 PDGFAP04085 211 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 NLRP12P59046 1061 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 BEND4Q6ZU67 534 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 SHKBP1Q8TBC3 707 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 HIF3AQ9Y2N7 669 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
CCDC38-204ENST00000546816 MEGF11A6BM72 1044 aa8.91□□□□□ -0.98
CCDC38-204ENST00000546816 TAL1P17542 331 aaPredicted RBP8.91□□□□□ -0.98
CCDC38-204ENST00000546816 DNM1Q05193 864 aaKnown RBP8.91□□□□□ -0.98
CCDC38-204ENST00000546816 HGSNATQ68CP4 663 aa8.91□□□□□ -0.98
CCDC38-204ENST00000546816 TMEM102Q8N9M5 508 aaPredicted RBP8.91□□□□□ -0.98
CCDC38-204ENST00000546816 RUSC1Q9BVN2 902 aa8.91□□□□□ -0.98
CCDC38-204ENST00000546816 A6NHS1 94 aa8.9□□□□□ -0.98
CCDC38-204ENST00000546816 PMEPA1Q969W9 287 aa8.9□□□□□ -0.98
CCDC38-204ENST00000546816 KCNF1Q9H3M0 494 aa8.9□□□□□ -0.98
CCDC38-204ENST00000546816 BTBD11A6QL63 1104 aa8.89□□□□□ -0.99
CCDC38-204ENST00000546816 MZF1P28698 734 aaPredicted RBP8.89□□□□□ -0.99
CCDC38-204ENST00000546816 TXKP42681 527 aa8.89□□□□□ -0.99
CCDC38-204ENST00000546816 C19orf57Q0VDD7 668 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms