RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 IFT140Q96RY7 1462 aa5.13□□□□□ -1.59
CUL3-215ENST00000546102 TARBP1Q13395 1621 aaKnown RBP5.12□□□□□ -1.59
CUL3-215ENST00000546102 FAM13AO94988 1023 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 MPSTP25325 297 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 CANXP27824 592 aaKnown RBP5.12□□□□□ -1.59
CUL3-215ENST00000546102 CCINQ13939 588 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 SHISA2Q6UWI4 295 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 FMR1NBQ8N0W7 255 aaPredicted RBP5.12□□□□□ -1.59
CUL3-215ENST00000546102 PIK3R5Q8WYR1 880 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 FAM161BQ96MY7 647 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 RBCK1Q9BYM8 510 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 ATAD2Q6PL18 1390 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 PRXQ9BXM0 1461 aa5.12□□□□□ -1.59
CUL3-215ENST00000546102 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
CUL3-215ENST00000546102 NDUFB5O43674 189 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 NFKB1P19838 968 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 MAPK8P45983 427 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 AFF1P51825 1210 aaKnown RBP5.11□□□□□ -1.59
CUL3-215ENST00000546102 XPCQ01831 940 aaPredicted RBP5.11□□□□□ -1.59
CUL3-215ENST00000546102 LDLRAD1Q5T700 205 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 MSL1Q68DK7 614 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 FAM35AQ86V20 835 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 STAG2Q8N3U4 1231 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 DTWD1Q8N5C7 304 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 TMEM87AQ8NBN3 555 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 TMC1Q8TDI8 760 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 COL26A1Q96A83 441 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 TNIKQ9UKE5 1360 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 RAD54L2Q9Y4B4 1467 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 PBRM1Q86U86 1689 aa5.11□□□□□ -1.59
CUL3-215ENST00000546102 TREHO43280 583 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 FOXO3O43524 673 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 HYAL3O43820 417 aaPredicted RBP5.1□□□□□ -1.59
CUL3-215ENST00000546102 LDHBP07195 334 aaKnown RBP5.1□□□□□ -1.59
CUL3-215ENST00000546102 CPB1P15086 417 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 NPR3P17342 541 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 IGFBP4P22692 258 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 FMR1Q06787 632 aaKnown RBP eCLIP5.1□□□□□ -1.59
CUL3-215ENST00000546102 RAD51AP2Q09MP3 1159 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 CEP162Q5TB80 1403 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 IER5Q5VY09 327 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 POTEAQ6S8J7 498 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 WFDC8Q8IUA0 241 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 SCG3Q8WXD2 468 aaKnown RBP5.1□□□□□ -1.59
CUL3-215ENST00000546102 VTI1AQ96AJ9 217 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 TANGO6Q9C0B7 1094 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 MRS2Q9HD23 443 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 RNF19AQ9NV58 838 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 PARP2Q9UGN5 583 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 BRPF3Q9ULD4 1205 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 RAPGEF2Q9Y4G8 1499 aa5.1□□□□□ -1.59
CUL3-215ENST00000546102 EIF4G3O43432 1585 aaKnown RBP5.09□□□□□ -1.59
CUL3-215ENST00000546102 GAPVD1Q14C86 1478 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 TGFBR3LH3BV60 316 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 AAMPQ13685 434 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 RTN1Q16799 776 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 ELMSAN1Q6PJG2 1045 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 DPH6Q7L8W6 267 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 METTL16Q86W50 562 aaKnown RBP5.09□□□□□ -1.59
CUL3-215ENST00000546102 NT5DC4Q86YG4 428 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 DUSP9Q99956 384 aaKnown RBP5.09□□□□□ -1.59
CUL3-215ENST00000546102 C2orf49Q9BVC5 232 aaPredicted RBP5.09□□□□□ -1.59
CUL3-215ENST00000546102 GSX2Q9BZM3 304 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 SAP130Q9H0E3 1048 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 FRRS1LQ9P0K9 344 aa5.09□□□□□ -1.59
CUL3-215ENST00000546102 PRPF40AO75400 957 aaKnown RBP5.08□□□□□ -1.6
CUL3-215ENST00000546102 IREB2P48200 963 aaKnown RBP5.08□□□□□ -1.6
CUL3-215ENST00000546102 PLCB3Q01970 1234 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 EHHADHQ08426 723 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 GIMAP6Q6P9H5 292 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 IGF2-ASQ6U949 168 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 FBXO11Q86XK2 927 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 DCAF11Q8TEB1 546 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 WFDC12Q8WWY7 111 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 DNAJC2Q99543 621 aaKnown RBP5.08□□□□□ -1.6
CUL3-215ENST00000546102 CCDC87Q9NVE4 849 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 VTI1BQ9UEU0 232 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 WWC3Q9ULE0 1092 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 RNF112Q9ULX5 631 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 CTTNBP2Q8WZ74 1663 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 ADAMTS12P58397 1594 aa5.08□□□□□ -1.6
CUL3-215ENST00000546102 GRIN2BQ13224 1484 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 SORBS3O60504 671 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 EIF1AXP47813 144 aaKnown RBP5.07□□□□□ -1.6
CUL3-215ENST00000546102 PSMD2Q13200 908 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 DSC3Q14574 896 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 C16orf46Q6P387 395 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 KRT25Q7Z3Z0 450 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 RNF34Q969K3 372 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 SETDB2Q96T68 719 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 TINF2Q9BSI4 451 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 CCSER2Q9H7U1 834 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 CAPN10Q9HC96 672 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 PCMTD2Q9NV79 361 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
CUL3-215ENST00000546102 CLIP1P30622 1438 aa5.06□□□□□ -1.6
CUL3-215ENST00000546102 CARMIL1Q5VZK9 1371 aa5.06□□□□□ -1.6
CUL3-215ENST00000546102 FZD6O60353 706 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms