RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 MEIOBQ8N635 442 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 LINC00116Q8NCU8 138 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 SLC16A10Q8TF71 515 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 RAPGEF4Q8WZA2 1011 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 LGR6Q9HBX8 967 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 LAMB4A4D0S4 1761 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 BCORQ6W2J9 1755 aa8.56□□□□□ -1.04
LDHC-209ENST00000545848 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 BMP2P12643 396 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 PTK2Q05397 1052 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 NPAS3Q8IXF0 933 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 PHACTR3Q96KR7 559 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
LDHC-209ENST00000545848 OCSTAMPQ9BR26 566 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 SCN7AQ01118 1682 aa8.55□□□□□ -1.04
LDHC-209ENST00000545848 ANKRD31Q8N7Z5 1873 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 VEGFBP49765 207 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 SLC15A2Q16348 729 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 MTHFSDQ2M296 383 aaKnown RBP8.54□□□□□ -1.04
LDHC-209ENST00000545848 CCDC184Q52MB2 194 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 ZNF530Q6P9A1 599 aaPredicted RBP8.54□□□□□ -1.04
LDHC-209ENST00000545848 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 KCTD15Q96SI1 283 aaPredicted RBP8.54□□□□□ -1.04
LDHC-209ENST00000545848 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 CDV3Q9UKY7 258 aaKnown RBP8.54□□□□□ -1.04
LDHC-209ENST00000545848 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
LDHC-209ENST00000545848 H3BM21 787 aa8.53□□□□□ -1.04
LDHC-209ENST00000545848 DDX10Q13206 875 aaKnown RBP8.53□□□□□ -1.04
LDHC-209ENST00000545848 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
LDHC-209ENST00000545848 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
LDHC-209ENST00000545848 COL11A2P13942 1736 aaPredicted RBP8.53□□□□□ -1.04
LDHC-209ENST00000545848 CACNA1SQ13698 1873 aa8.53□□□□□ -1.04
LDHC-209ENST00000545848 MAN1A2O60476 641 aa8.52□□□□□ -1.05
LDHC-209ENST00000545848 INSM1Q01101 510 aaPredicted RBP8.52□□□□□ -1.05
LDHC-209ENST00000545848 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
LDHC-209ENST00000545848 COL23A1Q86Y22 540 aaPredicted RBP8.52□□□□□ -1.05
LDHC-209ENST00000545848 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
LDHC-209ENST00000545848 IRF7Q92985 503 aa8.52□□□□□ -1.05
LDHC-209ENST00000545848 PGPEP1Q9NXJ5 209 aa8.52□□□□□ -1.05
LDHC-209ENST00000545848 KCNQ3O43525 872 aa8.51□□□□□ -1.05
LDHC-209ENST00000545848 SLC39A6Q13433 755 aa8.51□□□□□ -1.05
LDHC-209ENST00000545848 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
LDHC-209ENST00000545848 CCNL1Q9UK58 526 aaPredicted RBP8.51□□□□□ -1.05
LDHC-209ENST00000545848 NRXN2Q9P2S2 1712 aa8.51□□□□□ -1.05
LDHC-209ENST00000545848 SENP3-EIF4A1A0A087X0R7 540 aa8.5□□□□□ -1.05
LDHC-209ENST00000545848 DIAPH1O60610 1272 aaKnown RBP8.5□□□□□ -1.05
LDHC-209ENST00000545848 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
LDHC-209ENST00000545848 DHX9Q08211 1270 aaKnown RBP8.5□□□□□ -1.05
LDHC-209ENST00000545848 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
LDHC-209ENST00000545848 INTS6LQ5JSJ4 861 aaKnown RBP8.5□□□□□ -1.05
LDHC-209ENST00000545848 IFNL2Q8IZJ0 200 aa8.5□□□□□ -1.05
LDHC-209ENST00000545848 IL17REQ8NFR9 667 aa8.5□□□□□ -1.05
LDHC-209ENST00000545848 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
LDHC-209ENST00000545848 PLEKHG2Q9H7P9 1386 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 CHD4Q14839 1912 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 PRAMEF22A3QJZ6 481 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
LDHC-209ENST00000545848 RNMTO43148 476 aaKnown RBP8.49□□□□□ -1.05
LDHC-209ENST00000545848 PRKAR2BP31323 418 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 CBLBQ13191 982 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 NBPF20Q3BBV1 942 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 THUMPD2Q9BTF0 503 aaKnown RBP8.49□□□□□ -1.05
LDHC-209ENST00000545848 TRIM34Q9BYJ4 488 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 STK32BQ9NY57 414 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 SPG7Q9UQ90 795 aa8.49□□□□□ -1.05
LDHC-209ENST00000545848 TNRC6CQ9HCJ0 1690 aaKnown RBP8.49□□□□□ -1.05
LDHC-209ENST00000545848 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 LOC102724428A0A0B4J2F2 783 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 GMPRP36959 345 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 SIK1P57059 783 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 Q6ZVU0 165 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 NFATC2IPQ8NCF5 419 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 NLGN2Q8NFZ4 835 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 PLEKHF1Q96S99 279 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 ERBB4Q15303 1308 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
LDHC-209ENST00000545848 TMOD3Q9NYL9 352 aa8.47□□□□□ -1.05
LDHC-209ENST00000545848 STK17AQ9UEE5 414 aa8.47□□□□□ -1.05
LDHC-209ENST00000545848 NUP98P52948 1817 aa8.47□□□□□ -1.05
LDHC-209ENST00000545848 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.06
LDHC-209ENST00000545848 PIP4K2AP48426 406 aaPredicted RBP8.46□□□□□ -1.06
LDHC-209ENST00000545848 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
LDHC-209ENST00000545848 SLC27A3Q5K4L6 730 aa8.46□□□□□ -1.06
LDHC-209ENST00000545848 MCM10Q7L590 875 aa8.46□□□□□ -1.06
LDHC-209ENST00000545848 DZIP3Q86Y13 1208 aaKnown RBP8.46□□□□□ -1.06
LDHC-209ENST00000545848 DNAJC10Q8IXB1 793 aa8.46□□□□□ -1.06
LDHC-209ENST00000545848 DCAF5Q96JK2 942 aa8.46□□□□□ -1.06
LDHC-209ENST00000545848 FHDC1Q9C0D6 1143 aaPredicted RBP8.46□□□□□ -1.06
LDHC-209ENST00000545848 SLC52A2Q9HAB3 445 aa8.46□□□□□ -1.06
LDHC-209ENST00000545848 COL4A1P02462 1669 aa8.46□□□□□ -1.06
LDHC-209ENST00000545848 LAMB2P55268 1798 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 TTLL8A6PVC2 850 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 RAB15P59190 212 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
LDHC-209ENST00000545848 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
LDHC-209ENST00000545848 SRP68Q9UHB9 627 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms