RNA–Protein interactions for RNA: ENST00000545328.6

SEC23A-203, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-203ENST00000545328 A0A1B0GUL7 405 aa19.86■□□□□ 0.77
SEC23A-203ENST00000545328 SPDYE4A6NLX3 237 aa19.86■□□□□ 0.77
SEC23A-203ENST00000545328 M0R2C6 588 aa19.86■□□□□ 0.77
SEC23A-203ENST00000545328 TPM3P06753 285 aa19.86■□□□□ 0.77
SEC23A-203ENST00000545328 ADD1P35611 737 aaKnown RBP19.86■□□□□ 0.77
SEC23A-203ENST00000545328 FILIP1Q7Z7B0 1213 aa19.86■□□□□ 0.77
SEC23A-203ENST00000545328 ZSCAN16Q9H4T2 348 aaPredicted RBP19.86■□□□□ 0.77
SEC23A-203ENST00000545328 PLA2G4DQ86XP0 818 aa19.86■□□□□ 0.77
SEC23A-203ENST00000545328 TDRD7Q8NHU6 1098 aaKnown RBP19.86■□□□□ 0.77
SEC23A-203ENST00000545328 C1orf167Q5SNV9 1468 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 POLR3DP05423 398 aaPredicted RBP19.85■□□□□ 0.77
SEC23A-203ENST00000545328 CCDC73Q6ZRK6 1079 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 MTERF4Q7Z6M4 381 aaKnown RBP19.85■□□□□ 0.77
SEC23A-203ENST00000545328 SMARCC2Q8TAQ2 1214 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 CWC25Q9NXE8 425 aaPredicted RBP19.85■□□□□ 0.77
SEC23A-203ENST00000545328 LAMA4Q16363 1823 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 BECN2A8MW95 431 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 GORABQ5T7V8 394 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 PI16Q6UXB8 463 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 RBM43Q6ZSC3 357 aaKnown RBP19.85■□□□□ 0.77
SEC23A-203ENST00000545328 FSIP1Q8NA03 581 aa19.85■□□□□ 0.77
SEC23A-203ENST00000545328 ADORA1P30542 326 aa19.84■□□□□ 0.77
SEC23A-203ENST00000545328 NAA30Q147X3 362 aaPredicted RBP19.84■□□□□ 0.77
SEC23A-203ENST00000545328 SH3TC1Q8TE82 1336 aa19.84■□□□□ 0.77
SEC23A-203ENST00000545328 KINO60870 393 aaKnown RBP19.84■□□□□ 0.77
SEC23A-203ENST00000545328 ATF3P18847 181 aa19.84■□□□□ 0.77
SEC23A-203ENST00000545328 ARFGEF2Q9Y6D5 1785 aa19.84■□□□□ 0.77
SEC23A-203ENST00000545328 A0A1B0GVL5 298 aa19.83■□□□□ 0.77
SEC23A-203ENST00000545328 PDIA3P30101 505 aaKnown RBP19.83■□□□□ 0.77
SEC23A-203ENST00000545328 TPD52L1Q16890 204 aaPredicted RBP19.83■□□□□ 0.77
SEC23A-203ENST00000545328 OSBP2Q969R2 916 aa19.83■□□□□ 0.77
SEC23A-203ENST00000545328 CCDC94Q9BW85 323 aaPredicted RBP19.83■□□□□ 0.77
SEC23A-203ENST00000545328 GTF2F1P35269 517 aaKnown RBP eCLIP19.83■□□□□ 0.765e-8■■■■□ 22.6
SEC23A-203ENST00000545328 ZMYM1Q5SVZ6 1142 aa19.83■□□□□ 0.76
SEC23A-203ENST00000545328 C19orf44Q9H6X5 657 aa19.83■□□□□ 0.76
SEC23A-203ENST00000545328 TRPM3Q9HCF6 1732 aaPredicted RBP19.83■□□□□ 0.76
SEC23A-203ENST00000545328 TNNT1P13805 278 aa19.82■□□□□ 0.76
SEC23A-203ENST00000545328 ILDR1Q86SU0 546 aaPredicted RBP19.82■□□□□ 0.76
SEC23A-203ENST00000545328 H7C1W4 665 aa19.82■□□□□ 0.76
SEC23A-203ENST00000545328 HMGB1P09429 215 aaKnown RBP19.82■□□□□ 0.76
SEC23A-203ENST00000545328 EXOSC10Q01780 885 aaKnown RBP19.82■□□□□ 0.76
SEC23A-203ENST00000545328 IQCB1Q15051 598 aa19.82■□□□□ 0.76
SEC23A-203ENST00000545328 ATP2B3Q16720 1220 aa19.82■□□□□ 0.76
SEC23A-203ENST00000545328 HELLSQ9NRZ9 838 aa19.82■□□□□ 0.76
SEC23A-203ENST00000545328 CAMTA1Q9Y6Y1 1673 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 USP27XA6NNY8 438 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 EYA2O00167 538 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 BIN1O00499 593 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 RNF113AO15541 343 aaKnown RBP19.81■□□□□ 0.76
SEC23A-203ENST00000545328 SNW1Q13573 536 aaKnown RBP19.81■□□□□ 0.76
SEC23A-203ENST00000545328 AOPEPQ8N6M6 819 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 TRMT1Q9NXH9 659 aaKnown RBP19.81■□□□□ 0.76
SEC23A-203ENST00000545328 IL15P40933 162 aaPredicted RBP19.81■□□□□ 0.76
SEC23A-203ENST00000545328 SCARF1Q14162 830 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 STX1AQ16623 288 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 ISM2Q6H9L7 571 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 PDCL2Q8N4E4 241 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 SDF4Q9BRK5 362 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 DSCC1Q9BVC3 393 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 RCOR1Q9UKL0 485 aa19.81■□□□□ 0.76
SEC23A-203ENST00000545328 ADAMTS7Q9UKP4 1686 aa19.8■□□□□ 0.76
SEC23A-203ENST00000545328 U2AF2P26368 475 aaKnown RBP eCLIP19.8■□□□□ 0.761e-7■□□□□ 10.2
SEC23A-203ENST00000545328 CARMIL3Q8ND23 1372 aa19.8■□□□□ 0.76
SEC23A-203ENST00000545328 FDPSP14324 419 aaKnown RBP19.8■□□□□ 0.76
SEC23A-203ENST00000545328 SF3A1Q15459 793 aaKnown RBP19.8■□□□□ 0.76
SEC23A-203ENST00000545328 NAA16Q6N069 864 aaPredicted RBP19.8■□□□□ 0.76
SEC23A-203ENST00000545328 LLPHQ9BRT6 129 aaKnown RBP19.8■□□□□ 0.76
SEC23A-203ENST00000545328 TTC39AQ5SRH9 613 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 AEBP2Q6ZN18 517 aaPredicted RBP19.79■□□□□ 0.76
SEC23A-203ENST00000545328 BBXQ8WY36 941 aaPredicted RBP19.79■□□□□ 0.76
SEC23A-203ENST00000545328 PCDHA7Q9UN72 937 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 PALLDQ8WX93 1383 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 RXRAP19793 462 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 TOM1L2Q6ZVM7 507 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 SYNE4Q8N205 404 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 FAM89AQ96GI7 184 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 ZNF396Q96N95 335 aaPredicted RBP19.79■□□□□ 0.76
SEC23A-203ENST00000545328 CEP126Q9P2H0 1117 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 DENND2AQ9ULE3 1009 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 CLIC4Q9Y696 253 aa19.79■□□□□ 0.76
SEC23A-203ENST00000545328 TAF7LQ5H9L4 462 aa19.78■□□□□ 0.76
SEC23A-203ENST00000545328 KLF18A0A0U1RQI7 1052 aa19.78■□□□□ 0.76
SEC23A-203ENST00000545328 GOLGA8BA8MQT2 603 aa19.78■□□□□ 0.76
SEC23A-203ENST00000545328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.78■□□□□ 0.763e-10■■□□□ 11.5
SEC23A-203ENST00000545328 KAT6BQ8WYB5 2073 aa19.78■□□□□ 0.76
SEC23A-203ENST00000545328 FAM160A1Q05DH4 1040 aa19.77■□□□□ 0.76
SEC23A-203ENST00000545328 STK38Q15208 465 aa19.77■□□□□ 0.76
SEC23A-203ENST00000545328 CCDC57Q2TAC2 916 aa19.77■□□□□ 0.76
SEC23A-203ENST00000545328 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.76
SEC23A-203ENST00000545328 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.77■□□□□ 0.763e-7■□□□□ 10.9
SEC23A-203ENST00000545328 V9GYY5 206 aaPredicted RBP19.77■□□□□ 0.76
SEC23A-203ENST00000545328 NDUFA8P51970 172 aa19.77■□□□□ 0.76
SEC23A-203ENST00000545328 DHX40Q8IX18 779 aaKnown RBP19.77■□□□□ 0.76
SEC23A-203ENST00000545328 RFX7Q2KHR2 1363 aa19.77■□□□□ 0.75
SEC23A-203ENST00000545328 ZAP70P43403 619 aa19.76■□□□□ 0.75
SEC23A-203ENST00000545328 LRRC8AQ8IWT6 810 aa19.76■□□□□ 0.75
SEC23A-203ENST00000545328 XAGE2Q96GT9 111 aa19.76■□□□□ 0.75
SEC23A-203ENST00000545328 PUS7LQ9H0K6 701 aaKnown RBP19.76■□□□□ 0.75
SEC23A-203ENST00000545328 PRC1O43663 620 aa19.76■□□□□ 0.75
SEC23A-203ENST00000545328 C8orf76Q96K31 380 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms