RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 CNTNAP3Q9BZ76 1288 aa8.29□□□□□ -1.08
MDM2-230ENST00000543323 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
MDM2-230ENST00000543323 SOS2Q07890 1332 aaPredicted RBP8.29□□□□□ -1.08
MDM2-230ENST00000543323 FIGNL2A6NMB9 653 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 KLF4O43474 513 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 CLSTN1O94985 981 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 PF4P02776 101 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 SOX18P35713 384 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 LMNB2Q03252 620 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 FAM160A1Q05DH4 1040 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
MDM2-230ENST00000543323 RAB33AQ14088 237 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
MDM2-230ENST00000543323 OSMRQ99650 979 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 TRIM55Q9BYV6 548 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 ZFATQ9P243 1243 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 TLR6Q9Y2C9 796 aa8.28□□□□□ -1.08
MDM2-230ENST00000543323 U2SURPO15042 1029 aaKnown RBP8.27□□□□□ -1.09
MDM2-230ENST00000543323 EFSO43281 561 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 PSAPP07602 524 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 CELA3AP09093 270 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 HYAL2Q12891 473 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 CAMK2GQ13555 558 aaPredicted RBP8.27□□□□□ -1.09
MDM2-230ENST00000543323 SCARF1Q14162 830 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 SNAP47Q5SQN1 464 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 PCNX4Q63HM2 1172 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 FIGNL1Q6PIW4 674 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 CPLX3Q8WVH0 158 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 SRPK1Q96SB4 655 aaKnown RBP8.27□□□□□ -1.09
MDM2-230ENST00000543323 GAS2L1Q99501 681 aaPredicted RBP8.27□□□□□ -1.09
MDM2-230ENST00000543323 UBP1Q9NZI7 540 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 PRKAG3Q9UGI9 489 aa8.27□□□□□ -1.09
MDM2-230ENST00000543323 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
MDM2-230ENST00000543323 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
MDM2-230ENST00000543323 ITPKAP23677 461 aa8.26□□□□□ -1.09
MDM2-230ENST00000543323 APOBRQ0VD83 1088 aa8.26□□□□□ -1.09
MDM2-230ENST00000543323 GOLM1Q8NBJ4 401 aa8.26□□□□□ -1.09
MDM2-230ENST00000543323 NKD1Q969G9 470 aa8.26□□□□□ -1.09
MDM2-230ENST00000543323 SRRTQ9BXP5 876 aaKnown RBP8.26□□□□□ -1.09
MDM2-230ENST00000543323 TLR7Q9NYK1 1049 aaKnown RBP8.26□□□□□ -1.09
MDM2-230ENST00000543323 ENPP3O14638 875 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 ACPPP15309 386 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 NFKB1P19838 968 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 GRIA4P48058 902 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 LAMC2Q13753 1193 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
MDM2-230ENST00000543323 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 LRP10Q7Z4F1 713 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 SLITRK4Q8IW52 837 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 HNRNPLLQ8WVV9 542 aaKnown RBP8.25□□□□□ -1.09
MDM2-230ENST00000543323 NECAB3Q96P71 396 aaPredicted RBP8.25□□□□□ -1.09
MDM2-230ENST00000543323 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 EFCC1Q9HA90 598 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 PCDHGC4Q9Y5F7 938 aa8.25□□□□□ -1.09
MDM2-230ENST00000543323 ENC1O14682 589 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 MAP3K6O95382 1288 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 TFE3P19532 575 aaPredicted RBP8.24□□□□□ -1.09
MDM2-230ENST00000543323 RPS26P62854 115 aaKnown RBP8.24□□□□□ -1.09
MDM2-230ENST00000543323 PLAURQ03405 335 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 RASA3Q14644 834 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 FAM196AQ6ZSG2 479 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 CEP120Q8N960 986 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 GPATCH3Q96I76 525 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 BHLHE41Q9C0J9 482 aaPredicted RBP8.24□□□□□ -1.09
MDM2-230ENST00000543323 DZANK1Q9NVP4 752 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 SNTG2Q9NY99 539 aa8.24□□□□□ -1.09
MDM2-230ENST00000543323 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
MDM2-230ENST00000543323 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
MDM2-230ENST00000543323 ROBO2Q9HCK4 1378 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 DCDC2BA2VCK2 349 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 KHNYNO15037 678 aaKnown RBP8.23□□□□□ -1.09
MDM2-230ENST00000543323 CRKP46108 304 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 PTPROQ16827 1216 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 SPRED3Q2MJR0 410 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 RPS26P11Q5JNZ5 115 aaPredicted RBP8.23□□□□□ -1.09
MDM2-230ENST00000543323 SHDQ96IW2 340 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 RNPC3Q96LT9 517 aaKnown RBP8.23□□□□□ -1.09
MDM2-230ENST00000543323 DEPDC7Q96QD5 511 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 SEC31BQ9NQW1 1179 aa8.23□□□□□ -1.09
MDM2-230ENST00000543323 A0A096LPE4 126 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 A0A1W2PPZ6 126 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 TRPA1O75762 1119 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 TNP2Q05952 138 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 TNNI3KQ59H18 835 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 TRIM42Q8IWZ5 723 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 TMEM102Q8N9M5 508 aaPredicted RBP8.22□□□□□ -1.09
MDM2-230ENST00000543323 KCNB2Q92953 911 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 LRRC3Q9BY71 257 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
MDM2-230ENST00000543323 METTL12A8MUP2 240 aa8.21□□□□□ -1.1
MDM2-230ENST00000543323 NFKBIEO00221 500 aa8.21□□□□□ -1.1
MDM2-230ENST00000543323 SMAD7O15105 426 aaKnown RBP8.21□□□□□ -1.1
MDM2-230ENST00000543323 THBS1P07996 1170 aa8.21□□□□□ -1.1
MDM2-230ENST00000543323 MAPTP10636 758 aaKnown RBP8.21□□□□□ -1.1
MDM2-230ENST00000543323 BMP1P13497 986 aa8.21□□□□□ -1.1
MDM2-230ENST00000543323 SPEM2Q0P670 501 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms