RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 AEBP2Q6ZN18 517 aaPredicted RBP21.24■□□□□ 0.99
MDM2-230ENST00000543323 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
MDM2-230ENST00000543323 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
MDM2-230ENST00000543323 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
MDM2-230ENST00000543323 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
MDM2-230ENST00000543323 FOXD1Q16676 465 aa16.61■□□□□ 0.25
MDM2-230ENST00000543323 ADRA2BP18089 450 aa16.28■□□□□ 0.2
MDM2-230ENST00000543323 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
MDM2-230ENST00000543323 KCNA4P22459 653 aa16.03■□□□□ 0.16
MDM2-230ENST00000543323 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
MDM2-230ENST00000543323 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
MDM2-230ENST00000543323 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
MDM2-230ENST00000543323 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
MDM2-230ENST00000543323 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
MDM2-230ENST00000543323 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
MDM2-230ENST00000543323 MSH5O43196 834 aa15.17■□□□□ 0.02
MDM2-230ENST00000543323 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
MDM2-230ENST00000543323 SCAF1Q9H7N4 1312 aaKnown RBP14.88□□□□□ -0.03
MDM2-230ENST00000543323 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
MDM2-230ENST00000543323 ZBTB22O15209 634 aa14.77□□□□□ -0.05
MDM2-230ENST00000543323 MAPK8IP2Q13387 824 aaPredicted RBP14.62□□□□□ -0.07
MDM2-230ENST00000543323 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
MDM2-230ENST00000543323 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
MDM2-230ENST00000543323 RNF216Q9NWF9 866 aaPredicted RBP14.42□□□□□ -0.1
MDM2-230ENST00000543323 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
MDM2-230ENST00000543323 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
MDM2-230ENST00000543323 AMER1Q5JTC6 1135 aaPredicted RBP14.07□□□□□ -0.16
MDM2-230ENST00000543323 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
MDM2-230ENST00000543323 SLC24A1O60721 1099 aa14.04□□□□□ -0.16
MDM2-230ENST00000543323 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
MDM2-230ENST00000543323 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
MDM2-230ENST00000543323 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
MDM2-230ENST00000543323 FKBP8Q14318 412 aa13.83□□□□□ -0.2
MDM2-230ENST00000543323 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
MDM2-230ENST00000543323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.53□□□□□ -0.241e-8■■□□□ 11.6
MDM2-230ENST00000543323 ATF5Q9Y2D1 282 aaPredicted RBP13.46□□□□□ -0.25
MDM2-230ENST00000543323 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
MDM2-230ENST00000543323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
MDM2-230ENST00000543323 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
MDM2-230ENST00000543323 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
MDM2-230ENST00000543323 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
MDM2-230ENST00000543323 APLP2Q06481 763 aa13.12□□□□□ -0.31
MDM2-230ENST00000543323 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
MDM2-230ENST00000543323 POTEDQ86YR6 584 aa13.11□□□□□ -0.31
MDM2-230ENST00000543323 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
MDM2-230ENST00000543323 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
MDM2-230ENST00000543323 PROM2Q8N271 834 aa12.96□□□□□ -0.33
MDM2-230ENST00000543323 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
MDM2-230ENST00000543323 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
MDM2-230ENST00000543323 VASPP50552 380 aaPredicted RBP12.92□□□□□ -0.34
MDM2-230ENST00000543323 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
MDM2-230ENST00000543323 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
MDM2-230ENST00000543323 FBLN2P98095 1184 aa12.84□□□□□ -0.35
MDM2-230ENST00000543323 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
MDM2-230ENST00000543323 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
MDM2-230ENST00000543323 CAPN15O75808 1086 aa12.78□□□□□ -0.36
MDM2-230ENST00000543323 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
MDM2-230ENST00000543323 DCAF8L2P0C7V8 631 aa12.74□□□□□ -0.37
MDM2-230ENST00000543323 POLA2Q14181 598 aa12.71□□□□□ -0.37
MDM2-230ENST00000543323 PKD2Q13563 968 aa12.7□□□□□ -0.38
MDM2-230ENST00000543323 BCANQ96GW7 911 aa12.61□□□□□ -0.39
MDM2-230ENST00000543323 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
MDM2-230ENST00000543323 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
MDM2-230ENST00000543323 ABCB7O75027 752 aa12.58□□□□□ -0.4
MDM2-230ENST00000543323 DSG3P32926 999 aa12.53□□□□□ -0.4
MDM2-230ENST00000543323 SPOCK2Q92563 424 aa12.52□□□□□ -0.41
MDM2-230ENST00000543323 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
MDM2-230ENST00000543323 BBXQ8WY36 941 aaPredicted RBP12.49□□□□□ -0.41
MDM2-230ENST00000543323 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
MDM2-230ENST00000543323 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
MDM2-230ENST00000543323 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
MDM2-230ENST00000543323 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
MDM2-230ENST00000543323 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
MDM2-230ENST00000543323 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
MDM2-230ENST00000543323 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
MDM2-230ENST00000543323 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
MDM2-230ENST00000543323 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
MDM2-230ENST00000543323 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
MDM2-230ENST00000543323 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
MDM2-230ENST00000543323 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
MDM2-230ENST00000543323 RGL2O15211 777 aa12.32□□□□□ -0.44
MDM2-230ENST00000543323 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
MDM2-230ENST00000543323 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
MDM2-230ENST00000543323 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
MDM2-230ENST00000543323 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
MDM2-230ENST00000543323 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
MDM2-230ENST00000543323 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
MDM2-230ENST00000543323 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
MDM2-230ENST00000543323 MIER1Q8N108 512 aa12.25□□□□□ -0.45
MDM2-230ENST00000543323 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
MDM2-230ENST00000543323 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
MDM2-230ENST00000543323 CIZ1Q9ULV3 898 aaPredicted RBP12.17□□□□□ -0.46
MDM2-230ENST00000543323 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
MDM2-230ENST00000543323 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
MDM2-230ENST00000543323 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
MDM2-230ENST00000543323 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
MDM2-230ENST00000543323 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
MDM2-230ENST00000543323 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
MDM2-230ENST00000543323 NBR1Q14596 966 aa12□□□□□ -0.49
MDM2-230ENST00000543323 GSE1Q14687 1217 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms