RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GOLPH3LQ9H4A5 285 aa17.67■□□□□ 0.42
VARS2-211ENST00000541562 CBX1P83916 185 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 HAUS7Q99871 368 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 ADD1P35611 737 aaKnown RBP17.66■□□□□ 0.42
VARS2-211ENST00000541562 GREM2Q9H772 168 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 FER1L4A9Z1Z3 1794 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 PDCP20941 246 aa17.66■□□□□ 0.42
VARS2-211ENST00000541562 SMIM22K7EJ46 135 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 EYA2O00167 538 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 SLIT1O75093 1534 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 GOLGA6L19H0YKK7 550 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
VARS2-211ENST00000541562 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 SLC9C2Q5TAH2 1124 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 NFXL1Q6ZNB6 911 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 MIGA1Q8NAN2 632 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 TM6SF1Q9BZW5 370 aa17.65■□□□□ 0.42
VARS2-211ENST00000541562 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
VARS2-211ENST00000541562 FGAP02671 866 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 TPM2P07951 284 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 GOLGA8FQ08AF8 430 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 GOLGA8DPQ0D2H9 430 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 DHX32Q7L7V1 743 aaKnown RBP17.64■□□□□ 0.41
VARS2-211ENST00000541562 LRP10Q7Z4F1 713 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 CLIC4Q9Y696 253 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 NFAT5O94916 1531 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 ZNF500O60304 480 aaPredicted RBP17.64■□□□□ 0.41
VARS2-211ENST00000541562 IFIT5Q13325 482 aaKnown RBP17.64■□□□□ 0.41
VARS2-211ENST00000541562 RALYLQ86SE5 291 aaKnown RBP17.64■□□□□ 0.41
VARS2-211ENST00000541562 NSUN7Q8NE18 718 aaKnown RBP17.64■□□□□ 0.41
VARS2-211ENST00000541562 BTG4Q9NY30 223 aa17.64■□□□□ 0.41
VARS2-211ENST00000541562 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
VARS2-211ENST00000541562 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
VARS2-211ENST00000541562 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
VARS2-211ENST00000541562 ZMYND15Q9H091 742 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 USP42Q9H9J4 1324 aaKnown RBP17.63■□□□□ 0.41
VARS2-211ENST00000541562 B4E1Z4 1266 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 PRC1O43663 620 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 STK38Q15208 465 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 CCDC144BQ3MJ40 725 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 CREBRFQ8IUR6 639 aa17.63■□□□□ 0.41
VARS2-211ENST00000541562 ZRSR1Q15695 479 aaKnown RBP17.63■□□□□ 0.41
VARS2-211ENST00000541562 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
VARS2-211ENST00000541562 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
VARS2-211ENST00000541562 FAM177A1Q8N128 213 aaPredicted RBP17.62■□□□□ 0.41
VARS2-211ENST00000541562 AOPEPQ8N6M6 819 aa17.62■□□□□ 0.41
VARS2-211ENST00000541562 FAM200AQ8TCP9 573 aa17.62■□□□□ 0.41
VARS2-211ENST00000541562 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
VARS2-211ENST00000541562 ORC3Q9UBD5 711 aaPredicted RBP17.62■□□□□ 0.41
VARS2-211ENST00000541562 RNF113AO15541 343 aaKnown RBP17.62■□□□□ 0.41
VARS2-211ENST00000541562 PDIA3P30101 505 aaKnown RBP17.62■□□□□ 0.41
VARS2-211ENST00000541562 ITGA6P23229 1130 aa17.61■□□□□ 0.41
VARS2-211ENST00000541562 RESTQ13127 1097 aa17.61■□□□□ 0.41
VARS2-211ENST00000541562 MED23Q9ULK4 1368 aa17.61■□□□□ 0.41
VARS2-211ENST00000541562 KINO60870 393 aaKnown RBP17.61■□□□□ 0.41
VARS2-211ENST00000541562 RRP9O43818 475 aaKnown RBP17.61■□□□□ 0.41
VARS2-211ENST00000541562 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
VARS2-211ENST00000541562 PIGBQ92521 554 aa17.61■□□□□ 0.41
VARS2-211ENST00000541562 ABCF2Q9UG63 623 aa17.61■□□□□ 0.41
VARS2-211ENST00000541562 SMC2O95347 1197 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 IL2RBP14784 551 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 PHKA1P46020 1223 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 FUCA2Q9BTY2 467 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 ZBTB1Q9Y2K1 713 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 ZNF335Q9H4Z2 1342 aaPredicted RBP17.6■□□□□ 0.41
VARS2-211ENST00000541562 GPAA1O43292 621 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 TPD52L1Q16890 204 aaPredicted RBP17.6■□□□□ 0.41
VARS2-211ENST00000541562 PDILTQ8N807 584 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 NUP133Q8WUM0 1156 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 RIOK3O14730 519 aaKnown RBP17.6■□□□□ 0.41
VARS2-211ENST00000541562 PRKAB2O43741 272 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 KIF6Q6ZMV9 814 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 C8orf76Q96K31 380 aa17.6■□□□□ 0.41
VARS2-211ENST00000541562 USP27XA6NNY8 438 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 H7C1W4 665 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 IL15P40933 162 aaPredicted RBP17.59■□□□□ 0.41
VARS2-211ENST00000541562 CASP7P55210 303 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 UBE2Q2Q8WVN8 375 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 COBLO75128 1261 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 KRT32Q14532 448 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 FAM182BQ5T319 152 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 PXDNLA1KZ92 1463 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 ZNF213O14771 459 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 GLIPR1L2Q4G1C9 344 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 WWC3Q9ULE0 1092 aa17.59■□□□□ 0.41
VARS2-211ENST00000541562 BAZ2BQ9UIF8 2168 aaKnown RBP17.58■□□□□ 0.41
VARS2-211ENST00000541562 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.41
VARS2-211ENST00000541562 CACTINQ8WUQ7 758 aaKnown RBP17.58■□□□□ 0.41
VARS2-211ENST00000541562 HMG20BQ9P0W2 317 aa17.58■□□□□ 0.41
VARS2-211ENST00000541562 MCAMP43121 646 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms