RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ABTB2Q8N961 1025 aa9.08□□□□□ -0.96
SUDS3-202ENST00000541280 ZCCHC11Q5TAX3 1644 aaKnown RBP9.07□□□□□ -0.96
SUDS3-202ENST00000541280 MMP20O60882 483 aa9.07□□□□□ -0.96
SUDS3-202ENST00000541280 PSAPP07602 524 aa9.07□□□□□ -0.96
SUDS3-202ENST00000541280 SELPP16109 830 aa9.07□□□□□ -0.96
SUDS3-202ENST00000541280 ADGRE1Q14246 886 aa9.07□□□□□ -0.96
SUDS3-202ENST00000541280 PIK3R5Q8WYR1 880 aa9.07□□□□□ -0.96
SUDS3-202ENST00000541280 LENG1Q96BZ8 264 aaPredicted RBP9.07□□□□□ -0.96
SUDS3-202ENST00000541280 ARHGAP35Q9NRY4 1499 aa9.07□□□□□ -0.96
SUDS3-202ENST00000541280 TMEM88BA6NKF7 163 aa9.06□□□□□ -0.96
SUDS3-202ENST00000541280 ZAP70P43403 619 aa9.06□□□□□ -0.96
SUDS3-202ENST00000541280 MLLT1Q03111 559 aaPredicted RBP9.06□□□□□ -0.96
SUDS3-202ENST00000541280 C1orf115Q9H7X2 142 aa9.06□□□□□ -0.96
SUDS3-202ENST00000541280 RAPGEF6Q8TEU7 1601 aa9.05□□□□□ -0.96
SUDS3-202ENST00000541280 LOC102724428A0A0B4J2F2 783 aa9.05□□□□□ -0.96
SUDS3-202ENST00000541280 SIK1P57059 783 aa9.05□□□□□ -0.96
SUDS3-202ENST00000541280 DOC2BQ14184 412 aa9.05□□□□□ -0.96
SUDS3-202ENST00000541280 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
SUDS3-202ENST00000541280 DMRTC2Q8IXT2 367 aaPredicted RBP9.05□□□□□ -0.96
SUDS3-202ENST00000541280 SMG9Q9H0W8 520 aaKnown RBP9.05□□□□□ -0.96
SUDS3-202ENST00000541280 KIF13AQ9H1H9 1805 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 ITGB7P26010 798 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 NRG1Q02297 640 aaPredicted RBP9.04□□□□□ -0.96
SUDS3-202ENST00000541280 MBTPS1Q14703 1052 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 RSPO4Q2I0M5 234 aaPredicted RBP9.04□□□□□ -0.96
SUDS3-202ENST00000541280 NKAPLQ5M9Q1 402 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 FBXO11Q86XK2 927 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 TPSG1Q9NRR2 321 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 SEPT3Q9UH03 358 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 KDM6BO15054 1643 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 CLIP1P30622 1438 aa9.04□□□□□ -0.96
SUDS3-202ENST00000541280 NEO1Q92859 1461 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 COL17A1Q9UMD9 1497 aaPredicted RBP9.03□□□□□ -0.96
SUDS3-202ENST00000541280 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 ZBTB39O15060 712 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 EIF2AK2P19525 551 aaKnown RBP9.03□□□□□ -0.96
SUDS3-202ENST00000541280 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 WFDC8Q8IUA0 241 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 PLD4Q96BZ4 506 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 FNDC3AQ9Y2H6 1198 aaKnown RBP9.03□□□□□ -0.96
SUDS3-202ENST00000541280 ARAP3Q8WWN8 1544 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 CASKIN1Q8WXD9 1431 aa9.03□□□□□ -0.96
SUDS3-202ENST00000541280 TXNRD3Q86VQ6 643 aa9.02□□□□□ -0.97
SUDS3-202ENST00000541280 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
SUDS3-202ENST00000541280 MAP3K4Q9Y6R4 1608 aa9.02□□□□□ -0.97
SUDS3-202ENST00000541280 J3QW42 95 aa9.01□□□□□ -0.97
SUDS3-202ENST00000541280 PLCH2O75038 1416 aa9.01□□□□□ -0.97
SUDS3-202ENST00000541280 RAPGEF3O95398 923 aa9.01□□□□□ -0.97
SUDS3-202ENST00000541280 SSFA2P28290 1259 aa9.01□□□□□ -0.97
SUDS3-202ENST00000541280 CACTIN-AS1Q8N1I8 211 aa9.01□□□□□ -0.97
SUDS3-202ENST00000541280 GPR152Q8TDT2 470 aa9.01□□□□□ -0.97
SUDS3-202ENST00000541280 NSUN5Q96P11 429 aaKnown RBP9.01□□□□□ -0.97
SUDS3-202ENST00000541280 TROQ12816 1431 aaPredicted RBP9□□□□□ -0.97
SUDS3-202ENST00000541280 GHRHP01286 108 aa9□□□□□ -0.97
SUDS3-202ENST00000541280 SHISA2Q6UWI4 295 aa9□□□□□ -0.97
SUDS3-202ENST00000541280 RBSNQ9H1K0 784 aa9□□□□□ -0.97
SUDS3-202ENST00000541280 AKNAQ7Z591 1439 aa8.99□□□□□ -0.97
SUDS3-202ENST00000541280 KIF4AO95239 1232 aa8.99□□□□□ -0.97
SUDS3-202ENST00000541280 PDE12Q6L8Q7 609 aaKnown RBP8.99□□□□□ -0.97
SUDS3-202ENST00000541280 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
SUDS3-202ENST00000541280 SRA1Q9HD15 236 aaKnown RBP8.99□□□□□ -0.97
SUDS3-202ENST00000541280 CCDC18Q5T9S5 1454 aa8.99□□□□□ -0.97
SUDS3-202ENST00000541280 CFAP43Q8NDM7 1665 aa8.98□□□□□ -0.97
SUDS3-202ENST00000541280 FANCAO15360 1455 aa8.98□□□□□ -0.97
SUDS3-202ENST00000541280 DEAF1O75398 565 aaPredicted RBP8.98□□□□□ -0.97
SUDS3-202ENST00000541280 IGF2-ASQ6U949 168 aa8.98□□□□□ -0.97
SUDS3-202ENST00000541280 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
SUDS3-202ENST00000541280 ABCA9Q8IUA7 1624 aa8.98□□□□□ -0.97
SUDS3-202ENST00000541280 DENND4BO75064 1496 aaPredicted RBP8.97□□□□□ -0.97
SUDS3-202ENST00000541280 DLL1O00548 723 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 RPLP1P05386 114 aaKnown RBP8.97□□□□□ -0.97
SUDS3-202ENST00000541280 H2AFB1P0C5Y9 115 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 H2AFB2P0C5Z0 115 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 HYAL2Q12891 473 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 COL13A1Q5TAT6 717 aaPredicted RBP8.97□□□□□ -0.97
SUDS3-202ENST00000541280 XKR5Q6UX68 686 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 ABI2Q9NYB9 513 aaPredicted RBP8.97□□□□□ -0.97
SUDS3-202ENST00000541280 HECW1Q76N89 1606 aa8.97□□□□□ -0.97
SUDS3-202ENST00000541280 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.98
SUDS3-202ENST00000541280 DYRK3O43781 588 aa8.96□□□□□ -0.98
SUDS3-202ENST00000541280 NPR3P17342 541 aa8.96□□□□□ -0.98
SUDS3-202ENST00000541280 TTC39BQ5VTQ0 682 aaPredicted RBP8.96□□□□□ -0.98
SUDS3-202ENST00000541280 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
SUDS3-202ENST00000541280 NUDT16Q96DE0 195 aaKnown RBP8.96□□□□□ -0.98
SUDS3-202ENST00000541280 FYCO1Q9BQS8 1478 aa8.96□□□□□ -0.98
SUDS3-202ENST00000541280 DCAF11Q8TEB1 546 aa8.95□□□□□ -0.98
SUDS3-202ENST00000541280 MUC3BQ9H195 1237 aa8.95□□□□□ -0.98
SUDS3-202ENST00000541280 USP21Q9UK80 565 aa8.95□□□□□ -0.98
SUDS3-202ENST00000541280 SCAPERQ9BY12 1400 aa8.95□□□□□ -0.98
SUDS3-202ENST00000541280 MAGI2Q86UL8 1455 aa8.95□□□□□ -0.98
SUDS3-202ENST00000541280 CDK13Q14004 1512 aaKnown RBP8.95□□□□□ -0.98
SUDS3-202ENST00000541280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.95□□□□□ -0.98
SUDS3-202ENST00000541280 SCNN1AP37088 669 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 NOM1Q5C9Z4 860 aaKnown RBP8.94□□□□□ -0.98
SUDS3-202ENST00000541280 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 ATCAYQ86WG3 371 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 IL22RA1Q8N6P7 574 aa8.94□□□□□ -0.98
SUDS3-202ENST00000541280 GTF3C2Q8WUA4 911 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms