RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
SSPN-207ENST00000540266 RPS8P62241 208 aaKnown RBP13.72□□□□□ -0.21
SSPN-207ENST00000540266 PROSER3Q2NL68 480 aa13.72□□□□□ -0.21
SSPN-207ENST00000540266 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
SSPN-207ENST00000540266 SLC10A4Q96EP9 437 aa13.72□□□□□ -0.21
SSPN-207ENST00000540266 PTPN18Q99952 460 aa13.72□□□□□ -0.21
SSPN-207ENST00000540266 GTF3C3Q9Y5Q9 886 aa13.72□□□□□ -0.21
SSPN-207ENST00000540266 PTCH2Q9Y6C5 1203 aa13.72□□□□□ -0.21
SSPN-207ENST00000540266 PRKG1Q13976 671 aa13.71□□□□□ -0.21
SSPN-207ENST00000540266 DPF3Q92784 378 aa13.71□□□□□ -0.21
SSPN-207ENST00000540266 WNK4Q96J92 1243 aa13.71□□□□□ -0.21
SSPN-207ENST00000540266 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
SSPN-207ENST00000540266 SCN9AQ15858 1988 aa13.71□□□□□ -0.22
SSPN-207ENST00000540266 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.22
SSPN-207ENST00000540266 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 UNCXA6NJT0 531 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
SSPN-207ENST00000540266 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 CLMNQ96JQ2 1002 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
SSPN-207ENST00000540266 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
SSPN-207ENST00000540266 COL4A1P02462 1669 aa13.69□□□□□ -0.22
SSPN-207ENST00000540266 VCANP13611 3396 aa13.69□□□□□ -0.22
SSPN-207ENST00000540266 UFL1O94874 794 aa13.69□□□□□ -0.22
SSPN-207ENST00000540266 GJA5P36382 358 aa13.69□□□□□ -0.22
SSPN-207ENST00000540266 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
SSPN-207ENST00000540266 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
SSPN-207ENST00000540266 ZBED3Q96IU2 234 aaPredicted RBP13.69□□□□□ -0.22
SSPN-207ENST00000540266 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
SSPN-207ENST00000540266 G3V3G9 751 aa13.68□□□□□ -0.22
SSPN-207ENST00000540266 ANXA1P04083 346 aa13.68□□□□□ -0.22
SSPN-207ENST00000540266 DACT2Q5SW24 774 aa13.68□□□□□ -0.22
SSPN-207ENST00000540266 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
SSPN-207ENST00000540266 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
SSPN-207ENST00000540266 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
SSPN-207ENST00000540266 MYCP01106 439 aaPredicted RBP13.67□□□□□ -0.22
SSPN-207ENST00000540266 MMP14P50281 582 aa13.67□□□□□ -0.22
SSPN-207ENST00000540266 GPR153Q6NV75 609 aa13.67□□□□□ -0.22
SSPN-207ENST00000540266 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
SSPN-207ENST00000540266 FAM89AQ96GI7 184 aa13.67□□□□□ -0.22
SSPN-207ENST00000540266 MXD3Q9BW11 206 aa13.67□□□□□ -0.22
SSPN-207ENST00000540266 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
SSPN-207ENST00000540266 LAMB2P55268 1798 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
SSPN-207ENST00000540266 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSPN-207ENST00000540266 ARHGEF6Q15052 776 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 APOBEC3FQ8IUX4 373 aaKnown RBP13.66□□□□□ -0.22
SSPN-207ENST00000540266 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 XAGE3Q8WTP9 111 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 MS4A4AQ96JQ5 239 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 STXBP5LQ9Y2K9 1186 aa13.66□□□□□ -0.22
SSPN-207ENST00000540266 TAF1P21675 1872 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 SASH1O94885 1247 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 EIF2S2P20042 333 aaKnown RBP13.65□□□□□ -0.22
SSPN-207ENST00000540266 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 NR2E3Q9Y5X4 410 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 SPTBN5Q9NRC6 3674 aaKnown RBP13.65□□□□□ -0.22
SSPN-207ENST00000540266 KDM3BQ7LBC6 1761 aa13.65□□□□□ -0.22
SSPN-207ENST00000540266 SEC31BQ9NQW1 1179 aa13.64□□□□□ -0.23
SSPN-207ENST00000540266 SSC5DA1L4H1 1573 aa13.63□□□□□ -0.23
SSPN-207ENST00000540266 PPP1R12BO60237 982 aaPredicted RBP13.63□□□□□ -0.23
SSPN-207ENST00000540266 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
SSPN-207ENST00000540266 MTFR1Q15390 333 aa13.63□□□□□ -0.23
SSPN-207ENST00000540266 STRIP1Q5VSL9 837 aa13.63□□□□□ -0.23
SSPN-207ENST00000540266 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
SSPN-207ENST00000540266 DEFB123Q8N688 67 aa13.63□□□□□ -0.23
SSPN-207ENST00000540266 HTATIP2Q9BUP3 242 aa13.63□□□□□ -0.23
SSPN-207ENST00000540266 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
SSPN-207ENST00000540266 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
SSPN-207ENST00000540266 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
SSPN-207ENST00000540266 GJA8P48165 433 aa13.62□□□□□ -0.23
SSPN-207ENST00000540266 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
SSPN-207ENST00000540266 ARHGAP39Q9C0H5 1083 aa13.62□□□□□ -0.23
SSPN-207ENST00000540266 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
SSPN-207ENST00000540266 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
SSPN-207ENST00000540266 GNRH1P01148 92 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
SSPN-207ENST00000540266 NKX2-3Q8TAU0 364 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 BRI3BPQ8WY22 251 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 ZFYVE28Q9HCC9 887 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 MTMR10Q9NXD2 777 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 STAP2Q9UGK3 403 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 XDHP47989 1333 aa13.61□□□□□ -0.23
SSPN-207ENST00000540266 GJB1P08034 283 aa13.6□□□□□ -0.23
SSPN-207ENST00000540266 ATP2B4P23634 1241 aa13.6□□□□□ -0.23
SSPN-207ENST00000540266 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
SSPN-207ENST00000540266 COL1A1P02452 1464 aaPredicted RBP13.6□□□□□ -0.23
SSPN-207ENST00000540266 ATP5J2-PTCD1G3V325 749 aa13.59□□□□□ -0.23
SSPN-207ENST00000540266 BMP8BP34820 402 aa13.59□□□□□ -0.23
SSPN-207ENST00000540266 PRMT2P55345 433 aa13.59□□□□□ -0.23
SSPN-207ENST00000540266 LACTBP83111 547 aaPredicted RBP13.59□□□□□ -0.23
SSPN-207ENST00000540266 SUPT20HL1Q3ZLR7 823 aa13.59□□□□□ -0.23
SSPN-207ENST00000540266 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms