RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 V9GY48 417 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-204ENST00000540083 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
NECAP1-204ENST00000540083 PPEF1O14829 653 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-204ENST00000540083 XRCC6P12956 609 aaKnown RBP eCLIP9.24□□□□□ -0.93
NECAP1-204ENST00000540083 EIF5P55010 431 aaKnown RBP9.24□□□□□ -0.93
NECAP1-204ENST00000540083 SLC20A2Q08357 652 aa9.24□□□□□ -0.93
NECAP1-204ENST00000540083 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
NECAP1-204ENST00000540083 INTS5Q6P9B9 1019 aaKnown RBP9.24□□□□□ -0.93
NECAP1-204ENST00000540083 KIF6Q6ZMV9 814 aa9.24□□□□□ -0.93
NECAP1-204ENST00000540083 ANKLE1Q8NAG6 615 aa9.24□□□□□ -0.93
NECAP1-204ENST00000540083 NUP188Q5SRE5 1749 aa9.24□□□□□ -0.93
NECAP1-204ENST00000540083 TAF1LQ8IZX4 1826 aa9.24□□□□□ -0.93
NECAP1-204ENST00000540083 DYNC1I1O14576 645 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 A1BGP04217 495 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 POLD1P28340 1107 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 KCNQ4P56696 695 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 EXOSC9Q06265 439 aaKnown RBP9.23□□□□□ -0.93
NECAP1-204ENST00000540083 HSP90AB3PQ58FF7 597 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 CLEC4GQ6UXB4 293 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 RNF19BQ6ZMZ0 732 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 TRMT2AQ8IZ69 625 aaKnown RBP9.23□□□□□ -0.93
NECAP1-204ENST00000540083 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 HLA-CQ95604 372 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 TSR2Q969E8 191 aaKnown RBP9.23□□□□□ -0.93
NECAP1-204ENST00000540083 BEGAINQ9BUH8 593 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 NARFQ9UHQ1 456 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 ZBTB1Q9Y2K1 713 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 KDM2BQ8NHM5 1336 aa9.23□□□□□ -0.93
NECAP1-204ENST00000540083 ERVV-1B6SEH8 477 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 ELL2O00472 640 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-204ENST00000540083 BRD2P25440 801 aaKnown RBP9.22□□□□□ -0.93
NECAP1-204ENST00000540083 RGS3P49796 1198 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 ZNF827Q17R98 1081 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 ALDH1L2Q3SY69 923 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 DZIP3Q86Y13 1208 aaKnown RBP9.22□□□□□ -0.93
NECAP1-204ENST00000540083 C8orf58Q8NAV2 365 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 SPON1Q9HCB6 807 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 ZNF330Q9Y3S2 320 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-204ENST00000540083 COL15A1P39059 1388 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-204ENST00000540083 TJP1Q07157 1748 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 QSER1Q2KHR3 1735 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 LAMB4A4D0S4 1761 aa9.22□□□□□ -0.93
NECAP1-204ENST00000540083 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
NECAP1-204ENST00000540083 VAMP4O75379 141 aa9.21□□□□□ -0.94
NECAP1-204ENST00000540083 MYL6BP14649 208 aa9.21□□□□□ -0.94
NECAP1-204ENST00000540083 CCDC173Q0VFZ6 552 aa9.21□□□□□ -0.94
NECAP1-204ENST00000540083 COL23A1Q86Y22 540 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-204ENST00000540083 PNPLA7Q6ZV29 1317 aa9.21□□□□□ -0.94
NECAP1-204ENST00000540083 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
NECAP1-204ENST00000540083 HSP90B1P14625 803 aaKnown RBP9.2□□□□□ -0.94
NECAP1-204ENST00000540083 MCM5P33992 734 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 GUCA2AQ02747 115 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 KIAA1211Q6ZU35 1233 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 TEX2Q8IWB9 1127 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
NECAP1-204ENST00000540083 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-204ENST00000540083 CHPF2Q9P2E5 772 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
NECAP1-204ENST00000540083 USP42Q9H9J4 1324 aaKnown RBP9.2□□□□□ -0.94
NECAP1-204ENST00000540083 PRAMEF22A3QJZ6 481 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 SLC19A1P41440 591 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 NEXNQ0ZGT2 675 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 C8orf34Q49A92 452 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 COPS6Q7L5N1 327 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 ZSCAN30Q86W11 494 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 TSPYL6Q8N831 410 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 PLBD2Q8NHP8 589 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 EMID1Q96A84 441 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-204ENST00000540083 PPP1R9BQ96SB3 815 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 SETDB2Q96T68 719 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 CCDC94Q9BW85 323 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-204ENST00000540083 RCAN3Q9UKA8 241 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 PARP3Q9Y6F1 533 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 MAP3K15Q6ZN16 1313 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 UBR3Q6ZT12 1888 aa9.19□□□□□ -0.94
NECAP1-204ENST00000540083 NPHP1O15259 732 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 PTPRCP08575 1304 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
NECAP1-204ENST00000540083 DIXDC1Q155Q3 683 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 PARP10Q53GL7 1025 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
NECAP1-204ENST00000540083 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 FTSJ3Q8IY81 847 aaKnown RBP9.18□□□□□ -0.94
NECAP1-204ENST00000540083 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 KIF16BQ96L93 1317 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 NYXQ9GZU5 481 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 GRPEL1Q9HAV7 217 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 TBC1D2BQ9UPU7 963 aa9.18□□□□□ -0.94
NECAP1-204ENST00000540083 MYH14Q7Z406 1995 aaKnown RBP9.17□□□□□ -0.94
NECAP1-204ENST00000540083 MOXD2PA6NHM9 499 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 FDX1P10109 184 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 GYS1P13807 737 aa9.17□□□□□ -0.94
NECAP1-204ENST00000540083 NDUFV2P19404 249 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms