RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 RAD50Q92878 1312 aa30.66■■■□□ 2.5
KLHL42-202ENST00000539176 HIP1O00291 1037 aa30.65■■■□□ 2.5
KLHL42-202ENST00000539176 IFIT1P09914 478 aaKnown RBP30.65■■■□□ 2.5
KLHL42-202ENST00000539176 SCARF1Q14162 830 aa30.65■■■□□ 2.5
KLHL42-202ENST00000539176 CCDC125Q86Z20 511 aa30.65■■■□□ 2.5
KLHL42-202ENST00000539176 SLC5A1P13866 664 aa30.65■■■□□ 2.5
KLHL42-202ENST00000539176 GRAPQ13588 217 aa30.65■■■□□ 2.5
KLHL42-202ENST00000539176 GRAPLQ8TC17 118 aaPredicted RBP30.65■■■□□ 2.5
KLHL42-202ENST00000539176 SNRKQ9NRH2 765 aa30.65■■■□□ 2.5
KLHL42-202ENST00000539176 FSD1Q9BTV5 496 aa30.64■■■□□ 2.5
KLHL42-202ENST00000539176 DIAPH3Q9NSV4 1193 aa30.64■■■□□ 2.5
KLHL42-202ENST00000539176 PHKA1P46020 1223 aa30.63■■■□□ 2.49
KLHL42-202ENST00000539176 GOLIM4O00461 696 aa30.63■■■□□ 2.49
KLHL42-202ENST00000539176 PI16Q6UXB8 463 aa30.62■■■□□ 2.49
KLHL42-202ENST00000539176 HSPA4P34932 840 aa30.61■■■□□ 2.49
KLHL42-202ENST00000539176 CCDC102BQ68D86 513 aa30.61■■■□□ 2.49
KLHL42-202ENST00000539176 CWC27Q6UX04 472 aaKnown RBP30.61■■■□□ 2.49
KLHL42-202ENST00000539176 RAB3GAP1Q15042 981 aa30.61■■■□□ 2.49
KLHL42-202ENST00000539176 KIAA1211Q6ZU35 1233 aa30.61■■■□□ 2.49
KLHL42-202ENST00000539176 BRIP1Q9BX63 1249 aa30.61■■■□□ 2.49
KLHL42-202ENST00000539176 PAG1Q9NWQ8 432 aa30.61■■■□□ 2.49
KLHL42-202ENST00000539176 MCM4P33991 863 aa30.6■■■□□ 2.49
KLHL42-202ENST00000539176 RBM17Q96I25 401 aaKnown RBP30.6■■■□□ 2.49
KLHL42-202ENST00000539176 AKAP11Q9UKA4 1901 aa30.6■■■□□ 2.49
KLHL42-202ENST00000539176 KLRG2A4D1S0 409 aaPredicted RBP30.59■■■□□ 2.49
KLHL42-202ENST00000539176 CHGBP05060 677 aa30.59■■■□□ 2.49
KLHL42-202ENST00000539176 FKBP4Q02790 459 aaKnown RBP eCLIP30.59■■■□□ 2.49
KLHL42-202ENST00000539176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.59■■■□□ 2.49
KLHL42-202ENST00000539176 MCAMP43121 646 aa30.59■■■□□ 2.49
KLHL42-202ENST00000539176 GSE1Q14687 1217 aa30.59■■■□□ 2.49
KLHL42-202ENST00000539176 CWC22Q9HCG8 908 aaKnown RBP30.59■■■□□ 2.49
KLHL42-202ENST00000539176 ZAP70P43403 619 aa30.58■■■□□ 2.49
KLHL42-202ENST00000539176 LSG1Q9H089 658 aaKnown RBP30.58■■■□□ 2.49
KLHL42-202ENST00000539176 COL11A2P13942 1736 aaPredicted RBP30.58■■■□□ 2.49
KLHL42-202ENST00000539176 DDX11L8A8MPP1 907 aa30.57■■■□□ 2.48
KLHL42-202ENST00000539176 BCAMP50895 628 aa30.57■■■□□ 2.48
KLHL42-202ENST00000539176 NMIQ13287 307 aaPredicted RBP30.57■■■□□ 2.48
KLHL42-202ENST00000539176 FAM227BQ96M60 508 aa30.57■■■□□ 2.48
KLHL42-202ENST00000539176 NEK4P51957 841 aa30.57■■■□□ 2.48
KLHL42-202ENST00000539176 RFX7Q2KHR2 1363 aa30.56■■■□□ 2.48
KLHL42-202ENST00000539176 HOXA10P31260 410 aaPredicted RBP30.56■■■□□ 2.48
KLHL42-202ENST00000539176 PALD1Q9ULE6 856 aa30.56■■■□□ 2.48
KLHL42-202ENST00000539176 KLRK1P26718 216 aa30.55■■■□□ 2.48
KLHL42-202ENST00000539176 KBTBD3Q8NAB2 608 aa30.55■■■□□ 2.48
KLHL42-202ENST00000539176 GBP4Q96PP9 640 aa30.55■■■□□ 2.48
KLHL42-202ENST00000539176 ARID4AP29374 1257 aaPredicted RBP30.55■■■□□ 2.48
KLHL42-202ENST00000539176 UBE4AQ14139 1066 aa30.55■■■□□ 2.48
KLHL42-202ENST00000539176 GYG1P46976 350 aa30.54■■■□□ 2.48
KLHL42-202ENST00000539176 SLFNL1Q499Z3 407 aa30.54■■■□□ 2.48
KLHL42-202ENST00000539176 ANKRD2Q9GZV1 360 aa30.54■■■□□ 2.48
KLHL42-202ENST00000539176 A0A0D9SFI3 127 aa30.53■■■□□ 2.48
KLHL42-202ENST00000539176 SRGNP10124 158 aa30.53■■■□□ 2.48
KLHL42-202ENST00000539176 KCNJ4P48050 445 aa30.53■■■□□ 2.48
KLHL42-202ENST00000539176 UPF1Q92900 1129 aaKnown RBP eCLIP30.53■■■□□ 2.48
KLHL42-202ENST00000539176 ZNF512BQ96KM6 892 aaPredicted RBP30.53■■■□□ 2.48
KLHL42-202ENST00000539176 CRAMP1Q96RY5 1269 aa30.53■■■□□ 2.48
KLHL42-202ENST00000539176 PTMSP20962 102 aa30.53■■■□□ 2.48
KLHL42-202ENST00000539176 UQCRFS1P1P0C7P4 283 aa30.52■■■□□ 2.48
KLHL42-202ENST00000539176 PDE6BP35913 854 aa30.52■■■□□ 2.48
KLHL42-202ENST00000539176 NUCB2P80303 420 aa30.52■■■□□ 2.48
KLHL42-202ENST00000539176 IQSEC3Q9UPP2 1182 aaPredicted RBP30.52■■■□□ 2.48
KLHL42-202ENST00000539176 MYO5AQ9Y4I1 1855 aaKnown RBP30.51■■■□□ 2.48
KLHL42-202ENST00000539176 TNPO1Q92973 898 aaKnown RBP30.51■■■□□ 2.47
KLHL42-202ENST00000539176 HMG20BQ9P0W2 317 aa30.51■■■□□ 2.47
KLHL42-202ENST00000539176 ANKIB1Q9P2G1 1089 aa30.51■■■□□ 2.47
KLHL42-202ENST00000539176 RASGRF1Q13972 1273 aa30.5■■■□□ 2.47
KLHL42-202ENST00000539176 TICAM2Q86XR7 235 aa30.5■■■□□ 2.47
KLHL42-202ENST00000539176 CACNA1SQ13698 1873 aa30.5■■■□□ 2.47
KLHL42-202ENST00000539176 ZNF804BA4D1E1 1349 aa30.49■■■□□ 2.47
KLHL42-202ENST00000539176 CYP2E1P05181 493 aaPredicted RBP30.49■■■□□ 2.47
KLHL42-202ENST00000539176 NPR1P16066 1061 aa30.49■■■□□ 2.47
KLHL42-202ENST00000539176 GPSM2P81274 684 aa30.49■■■□□ 2.47
KLHL42-202ENST00000539176 FOXD4L1Q9NU39 408 aa30.49■■■□□ 2.47
KLHL42-202ENST00000539176 BBOX1O75936 387 aa30.48■■■□□ 2.47
KLHL42-202ENST00000539176 CLEC17AQ6ZS10 378 aa30.48■■■□□ 2.47
KLHL42-202ENST00000539176 C2CD5Q86YS7 1000 aa30.48■■■□□ 2.47
KLHL42-202ENST00000539176 FAM84BQ96KN1 310 aaPredicted RBP30.48■■■□□ 2.47
KLHL42-202ENST00000539176 GPR101Q96P66 508 aaPredicted RBP30.48■■■□□ 2.47
KLHL42-202ENST00000539176 PIH1D3Q9NQM4 214 aaKnown RBP30.48■■■□□ 2.47
KLHL42-202ENST00000539176 PPEF1O14829 653 aaPredicted RBP30.47■■■□□ 2.47
KLHL42-202ENST00000539176 TXNRD3Q86VQ6 643 aa30.47■■■□□ 2.47
KLHL42-202ENST00000539176 SPATA5Q8NB90 893 aa30.47■■■□□ 2.47
KLHL42-202ENST00000539176 SEC62Q99442 399 aaKnown RBP30.47■■■□□ 2.47
KLHL42-202ENST00000539176 TMX3Q96JJ7 454 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 SNX14Q9Y5W7 946 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 XDHP47989 1333 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 CCDC171Q6TFL3 1326 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 ZBTB7AO95365 584 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 CUL4AQ13619 759 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 KCNB2Q92953 911 aa30.46■■■□□ 2.47
KLHL42-202ENST00000539176 ZNF622Q969S3 477 aaKnown RBP eCLIP30.46■■■□□ 2.47
KLHL42-202ENST00000539176 INTS4Q96HW7 963 aaKnown RBP30.46■■■□□ 2.47
KLHL42-202ENST00000539176 CHRNA5P30532 468 aa30.45■■■□□ 2.47
KLHL42-202ENST00000539176 ZNF589Q86UQ0 364 aaPredicted RBP30.45■■■□□ 2.47
KLHL42-202ENST00000539176 MASTLQ96GX5 879 aa30.45■■■□□ 2.47
KLHL42-202ENST00000539176 NSFL1CQ9UNZ2 370 aaKnown RBP30.45■■■□□ 2.47
KLHL42-202ENST00000539176 MYH7P12883 1935 aa30.45■■■□□ 2.46
KLHL42-202ENST00000539176 PTH1RQ03431 593 aa30.44■■■□□ 2.46
KLHL42-202ENST00000539176 CAVIN4Q5BKX8 364 aa30.44■■■□□ 2.46
KLHL42-202ENST00000539176 OLFM4Q6UX06 510 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms