RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 CCDC94Q9BW85 323 aaPredicted RBP21.96■■□□□ 1.11
CHPF-203ENST00000535926 NAP1L2Q9ULW6 460 aaPredicted RBP21.96■■□□□ 1.11
CHPF-203ENST00000535926 MAST3O60307 1309 aa21.96■■□□□ 1.11
CHPF-203ENST00000535926 SALL1Q9NSC2 1324 aa21.96■■□□□ 1.11
CHPF-203ENST00000535926 CACTINQ8WUQ7 758 aaKnown RBP21.95■■□□□ 1.11
CHPF-203ENST00000535926 PUS3Q9BZE2 481 aaKnown RBP21.95■■□□□ 1.11
CHPF-203ENST00000535926 CWC25Q9NXE8 425 aaPredicted RBP21.95■■□□□ 1.11
CHPF-203ENST00000535926 CLIP2Q9UDT6 1046 aa21.95■■□□□ 1.11
CHPF-203ENST00000535926 AFDNP55196 1824 aaKnown RBP21.95■■□□□ 1.1
CHPF-203ENST00000535926 A1BGP04217 495 aa21.95■■□□□ 1.1
CHPF-203ENST00000535926 IL15P40933 162 aaPredicted RBP21.95■■□□□ 1.1
CHPF-203ENST00000535926 GPR108Q9NPR9 543 aa21.95■■□□□ 1.1
CHPF-203ENST00000535926 ARFGEF2Q9Y6D5 1785 aa21.95■■□□□ 1.1
CHPF-203ENST00000535926 GPHNQ9NQX3 736 aaPredicted RBP21.94■■□□□ 1.1
CHPF-203ENST00000535926 M0R2C6 588 aa21.94■■□□□ 1.1
CHPF-203ENST00000535926 IFIT1P09914 478 aaKnown RBP21.94■■□□□ 1.1
CHPF-203ENST00000535926 ENGASEQ8NFI3 743 aa21.94■■□□□ 1.1
CHPF-203ENST00000535926 ALS2Q96Q42 1657 aa21.94■■□□□ 1.1
CHPF-203ENST00000535926 A0A1B0GUL7 405 aa21.93■■□□□ 1.1
CHPF-203ENST00000535926 EYA2O00167 538 aa21.93■■□□□ 1.1
CHPF-203ENST00000535926 RNF113AO15541 343 aaKnown RBP21.93■■□□□ 1.1
CHPF-203ENST00000535926 CHAF1AQ13111 956 aaPredicted RBP21.93■■□□□ 1.1
CHPF-203ENST00000535926 ZBTB3Q9H5J0 574 aa21.93■■□□□ 1.1
CHPF-203ENST00000535926 FDPSP14324 419 aaKnown RBP21.93■■□□□ 1.1
CHPF-203ENST00000535926 ERCC4Q92889 916 aaPredicted RBP21.93■■□□□ 1.1
CHPF-203ENST00000535926 OSBP2Q969R2 916 aa21.93■■□□□ 1.1
CHPF-203ENST00000535926 C16orf45Q96MC5 204 aaPredicted RBP21.93■■□□□ 1.1
CHPF-203ENST00000535926 CAVIN2O95810 425 aa21.92■■□□□ 1.1
CHPF-203ENST00000535926 ZNF274Q96GC6 653 aaPredicted RBP21.92■■□□□ 1.1
CHPF-203ENST00000535926 ARID5BQ14865 1188 aa21.92■■□□□ 1.1
CHPF-203ENST00000535926 GLI3P10071 1580 aa21.91■■□□□ 1.1
CHPF-203ENST00000535926 CTIFO43310 598 aaKnown RBP21.91■■□□□ 1.1
CHPF-203ENST00000535926 COL18A1P39060 1754 aa21.91■■□□□ 1.1
CHPF-203ENST00000535926 FOXP2O15409 715 aa21.91■■□□□ 1.1
CHPF-203ENST00000535926 TMEM94Q12767 1356 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 GOLGA6L19H0YKK7 550 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 CTAGE5O15320 804 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 ME1P48163 572 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHPF-203ENST00000535926 STX1AQ16623 288 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 OTUD7BQ6GQQ9 843 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 SARM1Q6SZW1 724 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 CDC25BP30305 580 aa21.9■■□□□ 1.1
CHPF-203ENST00000535926 DHX40Q8IX18 779 aaKnown RBP21.9■■□□□ 1.1
CHPF-203ENST00000535926 ZNF396Q96N95 335 aaPredicted RBP21.9■■□□□ 1.1
CHPF-203ENST00000535926 LAMA4Q16363 1823 aa21.89■■□□□ 1.1
CHPF-203ENST00000535926 ATF3P18847 181 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 FAM160A1Q05DH4 1040 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 CCDC73Q6ZRK6 1079 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 FSIP1Q8NA03 581 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 CARMIL3Q8ND23 1372 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 KIF1AQ12756 1690 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 HAND2P61296 217 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 PPP4R3BQ5MIZ7 849 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 CCDC191Q8NCU4 936 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 PCDHA7Q9UN72 937 aa21.89■■□□□ 1.09
CHPF-203ENST00000535926 KINO60870 393 aaKnown RBP21.88■■□□□ 1.09
CHPF-203ENST00000535926 LRRC8AQ8IWT6 810 aa21.88■■□□□ 1.09
CHPF-203ENST00000535926 ADORA1P30542 326 aa21.88■■□□□ 1.09
CHPF-203ENST00000535926 ATL3Q6DD88 541 aa21.88■■□□□ 1.09
CHPF-203ENST00000535926 PKNOX2Q96KN3 472 aa21.88■■□□□ 1.09
CHPF-203ENST00000535926 TNNT1P13805 278 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 ATP2B3Q16720 1220 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 TICAM2Q86XR7 235 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 ANKRD7Q92527 254 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 MRFAP1L1Q96HT8 127 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 EVCP57679 992 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 FBXW7Q969H0 707 aa21.87■■□□□ 1.09
CHPF-203ENST00000535926 CIAO1O76071 339 aa21.86■■□□□ 1.09
CHPF-203ENST00000535926 FMR1NBQ8N0W7 255 aaPredicted RBP21.86■■□□□ 1.09
CHPF-203ENST00000535926 A0A1B0GVL5 298 aa21.86■■□□□ 1.09
CHPF-203ENST00000535926 SCARF1Q14162 830 aa21.86■■□□□ 1.09
CHPF-203ENST00000535926 FBXL16Q8N461 479 aa21.86■■□□□ 1.09
CHPF-203ENST00000535926 PRDM10Q9NQV6 1147 aa21.86■■□□□ 1.09
CHPF-203ENST00000535926 CEP126Q9P2H0 1117 aa21.86■■□□□ 1.09
CHPF-203ENST00000535926 BECN2A8MW95 431 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 FGAP02671 866 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 ATG3Q9NT62 314 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 GJB4Q9NTQ9 266 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 ABCC6O95255 1503 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 HSP90AB3PQ58FF7 597 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 PDCL2Q8N4E4 241 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 CCDC85AQ96PX6 553 aaPredicted RBP21.85■■□□□ 1.09
CHPF-203ENST00000535926 ANO10Q9NW15 660 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 RTEL1Q9NZ71 1219 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 CLIC4Q9Y696 253 aa21.85■■□□□ 1.09
CHPF-203ENST00000535926 USP27XA6NNY8 438 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 POLR3DP05423 398 aaPredicted RBP21.84■■□□□ 1.09
CHPF-203ENST00000535926 CBX1P83916 185 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 TPD52L1Q16890 204 aaPredicted RBP21.84■■□□□ 1.09
CHPF-203ENST00000535926 WASHC4Q2M389 1173 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 RAB11FIP4Q86YS3 637 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 XAGE2Q96GT9 111 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 NDUFA8P51970 172 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 ADALQ6DHV7 355 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 LINC00301Q8NCQ3 95 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.84■■□□□ 1.09
CHPF-203ENST00000535926 HPS5Q9UPZ3 1129 aa21.84■■□□□ 1.09
CHPF-203ENST00000535926 SMAP1Q8IYB5 467 aaPredicted RBP21.83■■□□□ 1.09
CHPF-203ENST00000535926 ZCRB1Q8TBF4 217 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms