RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 KCNA4P22459 653 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 GJB2P29033 226 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 GPT2Q8TD30 523 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 NEK1Q96PY6 1258 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 HMG20BQ9P0W2 317 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 SMC3Q9UQE7 1217 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
CLP1-205ENST00000533682 FSD2A1L4K1 749 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 FOXP2O15409 715 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 CCDC102BQ68D86 513 aa14.24□□□□□ -0.13
CLP1-205ENST00000533682 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLP1-205ENST00000533682 GOLGA6L3A6NEY3 463 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 SKOR2Q2VWA4 1001 aaPredicted RBP14.23□□□□□ -0.13
CLP1-205ENST00000533682 CHST3Q7LGC8 479 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 PODXL2Q9NZ53 605 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 SRP68Q9UHB9 627 aaKnown RBP14.23□□□□□ -0.13
CLP1-205ENST00000533682 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
CLP1-205ENST00000533682 COL5A3P25940 1745 aaPredicted RBP14.23□□□□□ -0.13
CLP1-205ENST00000533682 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLP1-205ENST00000533682 KLHL40Q2TBA0 621 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 ERFEQ4G0M1 354 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 TPRNQ4KMQ1 711 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 RBM27Q9P2N5 1060 aaKnown RBP14.23□□□□□ -0.13
CLP1-205ENST00000533682 DDX60Q8IY21 1712 aaKnown RBP14.23□□□□□ -0.13
CLP1-205ENST00000533682 SPEF2Q9C093 1822 aa14.23□□□□□ -0.13
CLP1-205ENST00000533682 RREB1Q92766 1687 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 LAMA4Q16363 1823 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 CAVIN1Q6NZI2 390 aaKnown RBP14.22□□□□□ -0.13
CLP1-205ENST00000533682 Q6ZUG5 572 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
CLP1-205ENST00000533682 STX6O43752 255 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 RRP9O43818 475 aaKnown RBP14.22□□□□□ -0.13
CLP1-205ENST00000533682 FGFR2P21802 821 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 HAND2P61296 217 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 BCL2L12Q9HB09 334 aa14.22□□□□□ -0.13
CLP1-205ENST00000533682 HSPA1LP34931 641 aa14.21□□□□□ -0.13
CLP1-205ENST00000533682 HSP90AA2PQ14568 343 aaPredicted RBP14.21□□□□□ -0.13
CLP1-205ENST00000533682 TBC1D9BQ66K14 1250 aa14.21□□□□□ -0.13
CLP1-205ENST00000533682 ZSCAN31Q96LW9 406 aaPredicted RBP14.21□□□□□ -0.13
CLP1-205ENST00000533682 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
CLP1-205ENST00000533682 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.13
CLP1-205ENST00000533682 WDR33Q9C0J8 1336 aaKnown RBP14.21□□□□□ -0.14
CLP1-205ENST00000533682 IDH1O75874 414 aaKnown RBP14.21□□□□□ -0.14
CLP1-205ENST00000533682 PUM3Q15397 648 aaKnown RBP14.21□□□□□ -0.14
CLP1-205ENST00000533682 CCDC152Q4G0S7 254 aa14.21□□□□□ -0.14
CLP1-205ENST00000533682 SLC9C2Q5TAH2 1124 aa14.21□□□□□ -0.14
CLP1-205ENST00000533682 MEX3CQ5U5Q3 659 aaKnown RBP14.21□□□□□ -0.14
CLP1-205ENST00000533682 RRAGDQ9NQL2 400 aaPredicted RBP14.21□□□□□ -0.14
CLP1-205ENST00000533682 E7EWF7 191 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 ZSCAN22P10073 491 aaPredicted RBP14.2□□□□□ -0.14
CLP1-205ENST00000533682 LPIN2Q92539 896 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 BTAF1O14981 1849 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 MYH7P12883 1935 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 MROH5Q6ZUA9 1318 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 GADD45BO75293 160 aaPredicted RBP14.2□□□□□ -0.14
CLP1-205ENST00000533682 FGAP02671 866 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 BCAMP50895 628 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 KRT32Q14532 448 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 BRF1Q92994 677 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 GJD4Q96KN9 370 aaPredicted RBP14.2□□□□□ -0.14
CLP1-205ENST00000533682 AK7Q96M32 723 aa14.2□□□□□ -0.14
CLP1-205ENST00000533682 IQSEC3Q9UPP2 1182 aaPredicted RBP14.2□□□□□ -0.14
CLP1-205ENST00000533682 GNPATO15228 680 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 PTMSP20962 102 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 WWC3Q9ULE0 1092 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 ZNF652Q9Y2D9 606 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 GPAA1O43292 621 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 JAK2O60674 1132 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 RASGRF1Q13972 1273 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 CLEC4GQ6UXB4 293 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 GPHNQ9NQX3 736 aaPredicted RBP14.19□□□□□ -0.14
CLP1-205ENST00000533682 CCNL1Q9UK58 526 aaPredicted RBP14.19□□□□□ -0.14
CLP1-205ENST00000533682 MTMR6Q9Y217 621 aa14.19□□□□□ -0.14
CLP1-205ENST00000533682 AFF2P51816 1311 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 SPATA31A6Q5VVP1 1343 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 VPS37CA5D8V6 355 aaPredicted RBP14.18□□□□□ -0.14
CLP1-205ENST00000533682 CHRNDQ07001 517 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 ANKRD1Q15327 319 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 USP48Q86UV5 1035 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 APPBP2Q92624 585 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
CLP1-205ENST00000533682 DENND2AQ9ULE3 1009 aa14.18□□□□□ -0.14
CLP1-205ENST00000533682 ARID4AP29374 1257 aaPredicted RBP14.17□□□□□ -0.14
CLP1-205ENST00000533682 ADD2P35612 726 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
CLP1-205ENST00000533682 FGD1P98174 961 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 APOBRQ0VD83 1088 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 FERMT3Q86UX7 667 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 NKX2-3Q8TAU0 364 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 ZNF532Q9HCE3 1301 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 CICQ96RK0 1608 aaPredicted RBP14.17□□□□□ -0.14
CLP1-205ENST00000533682 F13A1P00488 732 aa14.17□□□□□ -0.14
CLP1-205ENST00000533682 ZFYP08048 801 aaPredicted RBP14.17□□□□□ -0.14
CLP1-205ENST00000533682 HSP90B1P14625 803 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms