RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
CDC27-210ENST00000533415 KBTBD3Q8NAB2 608 aa16.29■□□□□ 0.2
CDC27-210ENST00000533415 CAMKK2Q96RR4 588 aa16.29■□□□□ 0.2
CDC27-210ENST00000533415 M0R2C6 588 aa16.28■□□□□ 0.2
CDC27-210ENST00000533415 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
CDC27-210ENST00000533415 LPIN2Q92539 896 aa16.28■□□□□ 0.2
CDC27-210ENST00000533415 TNS1Q9HBL0 1735 aaKnown RBP16.28■□□□□ 0.2
CDC27-210ENST00000533415 IDH1O75874 414 aaKnown RBP16.28■□□□□ 0.2
CDC27-210ENST00000533415 ADCK5Q3MIX3 580 aa16.28■□□□□ 0.2
CDC27-210ENST00000533415 TCEANC2Q96MN5 208 aa16.28■□□□□ 0.2
CDC27-210ENST00000533415 COL24A1Q17RW2 1714 aa16.27■□□□□ 0.2
CDC27-210ENST00000533415 SLC5A1P13866 664 aa16.27■□□□□ 0.2
CDC27-210ENST00000533415 HMG20BQ9P0W2 317 aa16.27■□□□□ 0.2
CDC27-210ENST00000533415 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
CDC27-210ENST00000533415 LRP5O75197 1615 aa16.27■□□□□ 0.19
CDC27-210ENST00000533415 KCNJ4P48050 445 aa16.27■□□□□ 0.19
CDC27-210ENST00000533415 WASHC4Q2M389 1173 aa16.27■□□□□ 0.19
CDC27-210ENST00000533415 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.19
CDC27-210ENST00000533415 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
CDC27-210ENST00000533415 RAD50Q92878 1312 aa16.26■□□□□ 0.19
CDC27-210ENST00000533415 NEK4P51957 841 aa16.26■□□□□ 0.19
CDC27-210ENST00000533415 OSBP2Q969R2 916 aa16.26■□□□□ 0.19
CDC27-210ENST00000533415 BSDC1Q9NW68 430 aaPredicted RBP16.26■□□□□ 0.19
CDC27-210ENST00000533415 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
CDC27-210ENST00000533415 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
CDC27-210ENST00000533415 SNX14Q9Y5W7 946 aa16.26■□□□□ 0.19
CDC27-210ENST00000533415 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
CDC27-210ENST00000533415 BECN1Q14457 450 aa16.25■□□□□ 0.19
CDC27-210ENST00000533415 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
CDC27-210ENST00000533415 PUS7LQ9H0K6 701 aaKnown RBP16.25■□□□□ 0.19
CDC27-210ENST00000533415 ST5P78524 1137 aa16.25■□□□□ 0.19
CDC27-210ENST00000533415 ANKIB1Q9P2G1 1089 aa16.25■□□□□ 0.19
CDC27-210ENST00000533415 HSPA4P34932 840 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 RTL9Q8NET4 1388 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 MAST3O60307 1309 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 SLC15A2Q16348 729 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 SPATA5Q8NB90 893 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
CDC27-210ENST00000533415 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
CDC27-210ENST00000533415 ILDR1Q86SU0 546 aaPredicted RBP16.23■□□□□ 0.19
CDC27-210ENST00000533415 MED23Q9ULK4 1368 aa16.23■□□□□ 0.19
CDC27-210ENST00000533415 RNF113AO15541 343 aaKnown RBP16.23■□□□□ 0.19
CDC27-210ENST00000533415 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
CDC27-210ENST00000533415 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
CDC27-210ENST00000533415 ABCF2Q9UG63 623 aa16.23■□□□□ 0.19
CDC27-210ENST00000533415 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
CDC27-210ENST00000533415 FAM84BQ96KN1 310 aaPredicted RBP16.22■□□□□ 0.19
CDC27-210ENST00000533415 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
CDC27-210ENST00000533415 COL1A1P02452 1464 aaPredicted RBP16.22■□□□□ 0.19
CDC27-210ENST00000533415 GRAPQ13588 217 aa16.22■□□□□ 0.19
CDC27-210ENST00000533415 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
CDC27-210ENST00000533415 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
CDC27-210ENST00000533415 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
CDC27-210ENST00000533415 GRAPLQ8TC17 118 aaPredicted RBP16.22■□□□□ 0.19
CDC27-210ENST00000533415 GPSM2P81274 684 aa16.21■□□□□ 0.19
CDC27-210ENST00000533415 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
CDC27-210ENST00000533415 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.18
CDC27-210ENST00000533415 MCCP23508 829 aa16.21■□□□□ 0.18
CDC27-210ENST00000533415 ARID4AP29374 1257 aaPredicted RBP16.21■□□□□ 0.18
CDC27-210ENST00000533415 CHRNA5P30532 468 aa16.21■□□□□ 0.18
CDC27-210ENST00000533415 HAND2P61296 217 aa16.21■□□□□ 0.18
CDC27-210ENST00000533415 SF3B2Q13435 895 aaKnown RBP16.21■□□□□ 0.18
CDC27-210ENST00000533415 RABEP1Q15276 862 aa16.21■□□□□ 0.18
CDC27-210ENST00000533415 ZMYM1Q5SVZ6 1142 aa16.21■□□□□ 0.18
CDC27-210ENST00000533415 SLC27A2O14975 620 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
CDC27-210ENST00000533415 STK11IPQ8N1F8 1099 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 MAGEB6Q8N7X4 407 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 NECTIN1Q15223 517 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 MAP4K1Q92918 833 aa16.2■□□□□ 0.18
CDC27-210ENST00000533415 FOXP2O15409 715 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
CDC27-210ENST00000533415 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.184e-6■□□□□ 10.8
CDC27-210ENST00000533415 LRRC2Q9BYS8 371 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 K7ELQ4 463 aaPredicted RBP16.19■□□□□ 0.18
CDC27-210ENST00000533415 HIP1O00291 1037 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 PDE6AP16499 860 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
CDC27-210ENST00000533415 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
CDC27-210ENST00000533415 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
CDC27-210ENST00000533415 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
CDC27-210ENST00000533415 RGL2O15211 777 aa16.18■□□□□ 0.18
CDC27-210ENST00000533415 HSPD1P10809 573 aaKnown RBP16.18■□□□□ 0.18
CDC27-210ENST00000533415 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
CDC27-210ENST00000533415 DENND2AQ9ULE3 1009 aa16.18■□□□□ 0.18
CDC27-210ENST00000533415 SMIM22K7EJ46 135 aa16.17■□□□□ 0.18
CDC27-210ENST00000533415 GRIK5Q16478 980 aa16.17■□□□□ 0.18
CDC27-210ENST00000533415 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
CDC27-210ENST00000533415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDC27-210ENST00000533415 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
CDC27-210ENST00000533415 GPAA1O43292 621 aa16.17■□□□□ 0.18
CDC27-210ENST00000533415 PRKAB2O43741 272 aa16.17■□□□□ 0.18
CDC27-210ENST00000533415 UFL1O94874 794 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms