RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 CTNNA2P26232 953 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
COLCA1-203ENST00000532918 RBM28Q9NW13 759 aaKnown RBP12.26□□□□□ -0.45
COLCA1-203ENST00000532918 ITGA6P23229 1130 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 GLT8D2Q9H1C3 349 aa12.26□□□□□ -0.45
COLCA1-203ENST00000532918 ARHGEF12Q9NZN5 1544 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 PABPN1LA6NDY0 278 aaKnown RBP12.25□□□□□ -0.45
COLCA1-203ENST00000532918 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 ARHGEF6Q15052 776 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 ENOX2Q16206 610 aaKnown RBP12.25□□□□□ -0.45
COLCA1-203ENST00000532918 CCDC102BQ68D86 513 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 MPNDQ8N594 471 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 NPHP4O75161 1426 aaPredicted RBP12.25□□□□□ -0.45
COLCA1-203ENST00000532918 PLEKHG3A1L390 1219 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
COLCA1-203ENST00000532918 KIF22Q14807 665 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 SLC5A4Q9NY91 659 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 GJB2P29033 226 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 TDRD12Q587J7 1177 aaKnown RBP12.25□□□□□ -0.45
COLCA1-203ENST00000532918 HOOK3Q86VS8 718 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 NLGN1Q8N2Q7 840 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 ALG1Q9BT22 464 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 TCHPQ9BT92 498 aa12.25□□□□□ -0.45
COLCA1-203ENST00000532918 PUF60Q9UHX1 559 aaKnown RBP12.25□□□□□ -0.45
COLCA1-203ENST00000532918 EYA2O00167 538 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 PARP1P09874 1014 aaKnown RBP12.24□□□□□ -0.45
COLCA1-203ENST00000532918 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 TBC1D5Q92609 795 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
COLCA1-203ENST00000532918 USP48Q86UV5 1035 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 BRF1Q92994 677 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 RAD50Q92878 1312 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 MAGI2Q86UL8 1455 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 DKC1O60832 514 aaKnown RBP eCLIP12.24□□□□□ -0.45
COLCA1-203ENST00000532918 SFPQP23246 707 aaKnown RBP eCLIP12.24□□□□□ -0.45
COLCA1-203ENST00000532918 TFCP2Q12800 502 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 DLGAP5Q15398 846 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 TAF12Q16514 161 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 KIF2AO00139 706 aaPredicted RBP12.24□□□□□ -0.45
COLCA1-203ENST00000532918 PPIP5K2O43314 1243 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 TOP1P11387 765 aaKnown RBP12.24□□□□□ -0.45
COLCA1-203ENST00000532918 KRT79Q5XKE5 535 aa12.24□□□□□ -0.45
COLCA1-203ENST00000532918 FILIP1Q7Z7B0 1213 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 MIGA1Q8NAN2 632 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 PDE1AP54750 535 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 RAB3GAP1Q15042 981 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 CAMK4Q16566 473 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 NUP88Q99567 741 aaPredicted RBP12.23□□□□□ -0.45
COLCA1-203ENST00000532918 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
COLCA1-203ENST00000532918 SYNCQ9H7C4 482 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 TMEM94Q12767 1356 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 BACH1O14867 736 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 ZBED4O75132 1171 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 STAT6P42226 847 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
COLCA1-203ENST00000532918 LRSAM1Q6UWE0 723 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
COLCA1-203ENST00000532918 RBM8AQ9Y5S9 174 aaKnown RBP12.23□□□□□ -0.45
COLCA1-203ENST00000532918 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
COLCA1-203ENST00000532918 NUCB1Q02818 461 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 TBC1D9Q6ZT07 1266 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 HELLSQ9NRZ9 838 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 CSADQ9Y600 493 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 ERICH4A6NGS2 130 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 CCDC91Q7Z6B0 441 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 ACTN2P35609 894 aa12.22□□□□□ -0.45
COLCA1-203ENST00000532918 PABPC4Q13310 644 aaKnown RBP eCLIP12.22□□□□□ -0.45
COLCA1-203ENST00000532918 CCDC117Q8IWD4 279 aaPredicted RBP12.21□□□□□ -0.45
COLCA1-203ENST00000532918 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.45
COLCA1-203ENST00000532918 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
COLCA1-203ENST00000532918 UQCRHLA0A096LP55 91 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 KIF5CO60282 957 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 UQCRHP07919 91 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.45
COLCA1-203ENST00000532918 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 PDCL2Q8N4E4 241 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 GPATCH11Q8N954 259 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 CTNNBL1Q8WYA6 563 aaPredicted RBP12.21□□□□□ -0.45
COLCA1-203ENST00000532918 PA2G4Q9UQ80 394 aaKnown RBP12.21□□□□□ -0.45
COLCA1-203ENST00000532918 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 FAM13AO94988 1023 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 CAVIN2O95810 425 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 MSANTD4Q8NCY6 345 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 ALS2CR12Q96Q35 445 aa12.21□□□□□ -0.45
COLCA1-203ENST00000532918 PTPRKQ15262 1439 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 KRT2P35908 639 aa12.21□□□□□ -0.46
COLCA1-203ENST00000532918 DCAF15Q66K64 600 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms