RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 Q7L0L9 218 aa13.93□□□□□ -0.18
PPP1CA-206ENST00000529724 HTATIP2Q9BUP3 242 aa13.93□□□□□ -0.18
PPP1CA-206ENST00000529724 NR2E3Q9Y5X4 410 aa13.93□□□□□ -0.18
PPP1CA-206ENST00000529724 USP17L3A6NCW0 530 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 USP17L4A6NCW7 530 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 G3V3G9 751 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 SASH1O94885 1247 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 MTFR1Q15390 333 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 PROSER3Q2NL68 480 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 OTUD7BQ6GQQ9 843 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 USP17L1Q7RTZ2 530 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 PRDM6Q9NQX0 595 aa13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.92□□□□□ -0.18
PPP1CA-206ENST00000529724 ANXA1P04083 346 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 ZNF428Q96B54 188 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 MXD3Q9BW11 206 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 MTMR10Q9NXD2 777 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 STAP2Q9UGK3 403 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 ZSWIM8A7E2V4 1837 aa13.91□□□□□ -0.18
PPP1CA-206ENST00000529724 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
PPP1CA-206ENST00000529724 ARHGEF6Q15052 776 aa13.9□□□□□ -0.18
PPP1CA-206ENST00000529724 CC2D1BQ5T0F9 858 aaKnown RBP13.9□□□□□ -0.18
PPP1CA-206ENST00000529724 APOBEC3FQ8IUX4 373 aaKnown RBP13.9□□□□□ -0.18
PPP1CA-206ENST00000529724 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
PPP1CA-206ENST00000529724 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
PPP1CA-206ENST00000529724 DACT2Q5SW24 774 aa13.89□□□□□ -0.19
PPP1CA-206ENST00000529724 PNISRQ8TF01 805 aaKnown RBP13.89□□□□□ -0.19
PPP1CA-206ENST00000529724 ZBED3Q96IU2 234 aaPredicted RBP13.89□□□□□ -0.19
PPP1CA-206ENST00000529724 ARHGAP39Q9C0H5 1083 aa13.89□□□□□ -0.19
PPP1CA-206ENST00000529724 COL1A1P02452 1464 aaPredicted RBP13.88□□□□□ -0.19
PPP1CA-206ENST00000529724 UNCXA6NJT0 531 aa13.88□□□□□ -0.19
PPP1CA-206ENST00000529724 GJA8P48165 433 aa13.88□□□□□ -0.19
PPP1CA-206ENST00000529724 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
PPP1CA-206ENST00000529724 COPS6Q7L5N1 327 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 NKX2-3Q8TAU0 364 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 BRI3BPQ8WY22 251 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 FAM89AQ96GI7 184 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 DEFB129Q9H1M3 183 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
PPP1CA-206ENST00000529724 PPP1R12BO60237 982 aaPredicted RBP13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 GJB1P08034 283 aa13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 EIF4G2P78344 907 aaKnown RBP eCLIP13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 XAGE3Q8WTP9 111 aa13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 GDF15Q99988 308 aa13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
PPP1CA-206ENST00000529724 LACTBP83111 547 aaPredicted RBP13.85□□□□□ -0.19
PPP1CA-206ENST00000529724 ZFYVE28Q9HCC9 887 aa13.85□□□□□ -0.19
PPP1CA-206ENST00000529724 EVI5O60447 810 aa13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 BMP8BP34820 402 aa13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 AIMP1Q12904 312 aaKnown RBP13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 LRIT3Q3SXY7 679 aa13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 FAM43AQ8N2R8 423 aa13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 MUC3AQ02505 3323 aa13.84□□□□□ -0.19
PPP1CA-206ENST00000529724 USP2O75604 605 aaPredicted RBP13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 CCL5P13501 91 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 CTGFP29279 349 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 PRMT2P55345 433 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 STRIP1Q5VSL9 837 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 OPTNQ96CV9 577 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 ISCA1Q9BUE6 129 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 OTOFQ9HC10 1997 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 XDHP47989 1333 aa13.83□□□□□ -0.2
PPP1CA-206ENST00000529724 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 GNRH1P01148 92 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 COL9A1P20849 921 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 MMP14P50281 582 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 NBPF12Q5TAG4 269 aaPredicted RBP13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 ANKRD13AQ8IZ07 590 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 ELP3Q9H9T3 547 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 PPP2R3BQ9Y5P8 575 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 EYSQ5T1H1 3165 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
PPP1CA-206ENST00000529724 TLR2O60603 784 aa13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 ATP2B4P23634 1241 aa13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 IREB2P48200 963 aaKnown RBP13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 BCAMP50895 628 aa13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 U2AF1L4Q8WU68 220 aaKnown RBP13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
PPP1CA-206ENST00000529724 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
PPP1CA-206ENST00000529724 CCL15-CCL14A0A0B4J2E2 113 aa13.8□□□□□ -0.2
PPP1CA-206ENST00000529724 GRK4P32298 578 aa13.8□□□□□ -0.2
PPP1CA-206ENST00000529724 KIF22Q14807 665 aa13.8□□□□□ -0.2
PPP1CA-206ENST00000529724 CCL15Q16663 113 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms