RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 TRIM66O15016 1216 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 PTCD1O75127 700 aaKnown RBP5.3□□□□□ -1.56
NPM1-210ENST00000523339 EPHX2P34913 555 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 GSK3AP49840 483 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 CABP4P57796 275 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 DDR1Q08345 913 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 TRIM26Q12899 539 aaPredicted RBP5.3□□□□□ -1.56
NPM1-210ENST00000523339 TTLL12Q14166 644 aaPredicted RBP5.3□□□□□ -1.56
NPM1-210ENST00000523339 ARID5BQ14865 1188 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 USPL1Q5W0Q7 1092 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 NPM2Q86SE8 214 aaKnown RBP5.3□□□□□ -1.56
NPM1-210ENST00000523339 GPR161Q8N6U8 529 aaKnown RBP5.3□□□□□ -1.56
NPM1-210ENST00000523339 PCGF6Q9BYE7 350 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 ATG3Q9NT62 314 aa5.3□□□□□ -1.56
NPM1-210ENST00000523339 CNTNAP4Q9C0A0 1308 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 USP42Q9H9J4 1324 aaKnown RBP5.29□□□□□ -1.56
NPM1-210ENST00000523339 C4AP0C0L4 1744 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 POLRMTO00411 1230 aaKnown RBP5.29□□□□□ -1.56
NPM1-210ENST00000523339 DLL1O00548 723 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 AOC2O75106 756 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 ZIC2O95409 532 aaPredicted RBP5.29□□□□□ -1.56
NPM1-210ENST00000523339 FBLN1P23142 703 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 PDE6BP35913 854 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 MAP2K2P36507 400 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 QPCTQ16769 361 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 C6orf118Q5T5N4 469 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 RIC3Q7Z5B4 369 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 PARP9Q8IXQ6 854 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 IFNL2Q8IZJ0 200 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 SLC12A5Q9H2X9 1139 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 ZNF408Q9H9D4 720 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
NPM1-210ENST00000523339 LIMD1Q9UGP4 676 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 GJA3Q9Y6H8 435 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 EDC4Q6P2E9 1401 aaKnown RBP5.29□□□□□ -1.56
NPM1-210ENST00000523339 RTL1A6NKG5 1358 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 ROCK2O75116 1388 aaKnown RBP5.29□□□□□ -1.56
NPM1-210ENST00000523339 SBNO2Q9Y2G9 1366 aa5.29□□□□□ -1.56
NPM1-210ENST00000523339 RNF123Q5XPI4 1314 aa5.28□□□□□ -1.56
NPM1-210ENST00000523339 SPDYE5A6NIY4 337 aa5.28□□□□□ -1.56
NPM1-210ENST00000523339 TULP1O00294 542 aaPredicted RBP5.28□□□□□ -1.56
NPM1-210ENST00000523339 ADH1CP00326 375 aa5.28□□□□□ -1.56
NPM1-210ENST00000523339 SERPINB2P05120 415 aa5.28□□□□□ -1.56
NPM1-210ENST00000523339 CRKLP46109 303 aaKnown RBP5.28□□□□□ -1.56
NPM1-210ENST00000523339 CSPP1Q1MSJ5 1256 aa5.28□□□□□ -1.56
NPM1-210ENST00000523339 RTL5Q5HYW3 569 aaPredicted RBP5.28□□□□□ -1.56
NPM1-210ENST00000523339 LTN1O94822 1766 aa5.28□□□□□ -1.56
NPM1-210ENST00000523339 KDM6AO15550 1401 aaPredicted RBP5.28□□□□□ -1.56
NPM1-210ENST00000523339 FAM208AQ9UK61 1670 aaKnown RBP5.28□□□□□ -1.56
NPM1-210ENST00000523339 WASHC2AQ641Q2 1341 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 PPFIA3O75145 1194 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 HSP90AB1P08238 724 aaKnown RBP5.27□□□□□ -1.57
NPM1-210ENST00000523339 GJA5P36382 358 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 BRPF1P55201 1214 aaPredicted RBP5.27□□□□□ -1.57
NPM1-210ENST00000523339 KRT76Q01546 638 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 HSP90AB2PQ58FF8 381 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 AKAP4Q5JQC9 854 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 HABP4Q5JVS0 413 aaKnown RBP5.27□□□□□ -1.57
NPM1-210ENST00000523339 CIAPIN1Q6FI81 312 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 SLC17A8Q8NDX2 589 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 FAM174AQ8TBP5 190 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 JDP2Q8WYK2 163 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 CNKSR1Q969H4 720 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 ZNF330Q9Y3S2 320 aaPredicted RBP5.27□□□□□ -1.57
NPM1-210ENST00000523339 RAB3GAP2Q9H2M9 1393 aa5.27□□□□□ -1.57
NPM1-210ENST00000523339 UBR3Q6ZT12 1888 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 TOGARAM1Q9Y4F4 1720 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
NPM1-210ENST00000523339 VSIG8P0DPA2 414 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 PHKG2P15735 406 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 EIF6P56537 245 aaKnown RBP5.26□□□□□ -1.57
NPM1-210ENST00000523339 ST5P78524 1137 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 SCARF1Q14162 830 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 NFIXQ14938 502 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 CCDC93Q567U6 631 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 GGNBP2Q9H3C7 697 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 DNMT3LQ9UJW3 386 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 HDAC9Q9UKV0 1011 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 A0A1W2PP64 1363 aa5.26□□□□□ -1.57
NPM1-210ENST00000523339 ARFGEF1Q9Y6D6 1849 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 PDE4DIPQ5VU43 2346 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 ST20-MTHFSA0A0A6YYL1 179 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 ERVV-2B6SEH9 535 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 TRAF5O00463 557 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 LILRB3O75022 631 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 TM4SF1P30408 202 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 MTHFSP49914 203 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 NOGQ13253 232 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 C1orf141Q5JVX7 400 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 MYSM1Q5VVJ2 828 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 PRPF40BQ6NWY9 871 aaKnown RBP5.25□□□□□ -1.57
NPM1-210ENST00000523339 SH3RF1Q7Z6J0 888 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 GPC2Q8N158 579 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 ZNF277Q9NRM2 450 aaPredicted RBP5.25□□□□□ -1.57
NPM1-210ENST00000523339 FLT4P35916 1363 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 TIAM2Q8IVF5 1701 aa5.25□□□□□ -1.57
NPM1-210ENST00000523339 TAF1LQ8IZX4 1826 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms