RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
SPARC-205ENST00000522348 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
SPARC-205ENST00000522348 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
SPARC-205ENST00000522348 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
SPARC-205ENST00000522348 SERPINB2P05120 415 aa11.62□□□□□ -0.55
SPARC-205ENST00000522348 CREB3L3Q68CJ9 461 aa11.62□□□□□ -0.55
SPARC-205ENST00000522348 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
SPARC-205ENST00000522348 CNBD1Q8NA66 436 aa11.62□□□□□ -0.55
SPARC-205ENST00000522348 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
SPARC-205ENST00000522348 TFCP2L1Q9NZI6 479 aa11.62□□□□□ -0.55
SPARC-205ENST00000522348 MED23Q9ULK4 1368 aa11.62□□□□□ -0.55
SPARC-205ENST00000522348 SLC27A2O14975 620 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 MCAMP43121 646 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 PHKA1P46020 1223 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 ST5P78524 1137 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 KRT32Q14532 448 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 SPATA5Q8NB90 893 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
SPARC-205ENST00000522348 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 CAMKK2Q96RR4 588 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 DSCC1Q9BVC3 393 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 SCN7AQ01118 1682 aa11.61□□□□□ -0.55
SPARC-205ENST00000522348 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 MYH3P11055 1940 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
SPARC-205ENST00000522348 SCARF1Q14162 830 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 UBE3CQ15386 1083 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 CAVIN4Q5BKX8 364 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 PRR5LQ6MZQ0 368 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
SPARC-205ENST00000522348 APPBP2Q92624 585 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 ALDH8A1Q9H2A2 487 aaPredicted RBP11.6□□□□□ -0.55
SPARC-205ENST00000522348 ZSWIM6Q9HCJ5 1215 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 CYP46A1Q9Y6A2 500 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
SPARC-205ENST00000522348 DDX60Q8IY21 1712 aaKnown RBP11.6□□□□□ -0.55
SPARC-205ENST00000522348 DDIT3P35638 169 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 BCAMP50895 628 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 MAP3K12Q12852 859 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 GRAPQ13588 217 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 GRAPLQ8TC17 118 aaPredicted RBP11.59□□□□□ -0.55
SPARC-205ENST00000522348 RBM17Q96I25 401 aaKnown RBP11.59□□□□□ -0.55
SPARC-205ENST00000522348 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
SPARC-205ENST00000522348 CTNNA3Q9UI47 895 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 LRP5O75197 1615 aa11.59□□□□□ -0.55
SPARC-205ENST00000522348 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 TNS1Q9HBL0 1735 aaKnown RBP11.58□□□□□ -0.56
SPARC-205ENST00000522348 SEMA3EO15041 775 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 ZBTB22O15209 634 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 BBOX1O75936 387 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
SPARC-205ENST00000522348 ADD2P35612 726 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 SLC9C2Q5TAH2 1124 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 RUFY3Q7L099 469 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 VPS37DQ86XT2 251 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 CCDC24Q8N4L8 307 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 RPGRQ92834 1020 aaKnown RBP11.58□□□□□ -0.56
SPARC-205ENST00000522348 OSBP2Q969R2 916 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 INTS4Q96HW7 963 aaKnown RBP11.58□□□□□ -0.56
SPARC-205ENST00000522348 TMX3Q96JJ7 454 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 ZSCAN31Q96LW9 406 aaPredicted RBP11.58□□□□□ -0.56
SPARC-205ENST00000522348 JAKMIP1Q96N16 626 aaKnown RBP11.58□□□□□ -0.56
SPARC-205ENST00000522348 TTC14Q96N46 770 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 LEMD3Q9Y2U8 911 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 LAMB2P55268 1798 aa11.58□□□□□ -0.56
SPARC-205ENST00000522348 KLRG2A4D1S0 409 aaPredicted RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 SNAP23O00161 211 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 POLRMTO00411 1230 aaKnown RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 HSPD1P10809 573 aaKnown RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 HOXA10P31260 410 aaPredicted RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 CUL4AQ13619 759 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 RASGRF1Q13972 1273 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 ANKRD1Q15327 319 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 NFKBIBQ15653 356 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 CRY2Q49AN0 593 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 CCDC129Q6ZRS4 1044 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 FBXO33Q7Z6M2 555 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 UPF3BQ9BZI7 483 aaKnown RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 PIH1D3Q9NQM4 214 aaKnown RBP11.57□□□□□ -0.56
SPARC-205ENST00000522348 DENND2AQ9ULE3 1009 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 LIMCH1Q9UPQ0 1083 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 MAST3O60307 1309 aa11.57□□□□□ -0.56
SPARC-205ENST00000522348 M0R2C6 588 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 IGSF3O75054 1194 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 CHGBP05060 677 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
SPARC-205ENST00000522348 NUCB2P80303 420 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
SPARC-205ENST00000522348 ZNF827Q17R98 1081 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 ADCK5Q3MIX3 580 aa11.56□□□□□ -0.56
SPARC-205ENST00000522348 BLOC1S2Q6QNY1 142 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms