RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	RARA	P10276	462 aa		5.79	□□□□□ -1.48
EFCAB13-208	ENST00000520776	SOX18	P35713	384 aa		5.79	□□□□□ -1.48
EFCAB13-208	ENST00000520776	NRG1	Q02297	640 aa	Predicted RBP	5.79	□□□□□ -1.48
EFCAB13-208	ENST00000520776	TRAPPC3L	Q5T215	181 aa		5.79	□□□□□ -1.48
EFCAB13-208	ENST00000520776	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.79	□□□□□ -1.48
EFCAB13-208	ENST00000520776	FNDC3A	Q9Y2H6	1198 aa	Known RBP	5.79	□□□□□ -1.48
EFCAB13-208	ENST00000520776	UBAP1L	F5GYI3	381 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	SORBS3	O60504	671 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	CPNE3	O75131	537 aa	Known RBP	5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	PSMD2	Q13200	908 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	USPL1	Q5W0Q7	1092 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	PDE12	Q6L8Q7	609 aa	Known RBP	5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	FAM35A	Q86V20	835 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	DCAF11	Q8TEB1	546 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	FBF1	Q8TES7	1133 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	BCL11A	Q9H165	835 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	IGFLR1	Q9H665	355 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	ELP3	Q9H9T3	547 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	ZFYVE28	Q9HCC9	887 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	NAGPA	Q9UK23	515 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776		A0A0A0MRY4	1105 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	GNA15	P30679	374 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	AFF1	P51825	1210 aa	Known RBP	5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	C8orf86	Q6ZUL3	223 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	ILDR2	Q71H61	639 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	TLR7	Q9NYK1	1049 aa	Known RBP	5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	TMEM63C	Q9P1W3	806 aa		5.78	□□□□□ -1.48
EFCAB13-208	ENST00000520776	XYLB	O75191	536 aa		5.77	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ZNF438	Q7Z4V0	828 aa		5.77	□□□□□ -1.49
EFCAB13-208	ENST00000520776	CACTIN-AS1	Q8N1I8	211 aa		5.77	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ZFAT	Q9P243	1243 aa		5.77	□□□□□ -1.49
EFCAB13-208	ENST00000520776	AK5	Q9Y6K8	562 aa		5.77	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SCAMP3	O14828	347 aa	Known RBP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	PSAP	P07602	524 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	HDLBP	Q00341	1268 aa	Known RBP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	PLAUR	Q03405	335 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ELMSAN1	Q6PJG2	1045 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	TMEM87A	Q8NBN3	555 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	CCDC74A	Q96AQ1	378 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	LENG1	Q96BZ8	264 aa	Predicted RBP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	FRMD6	Q96NE9	622 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	LPIN3	Q9BQK8	851 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SRA1	Q9HD15	236 aa	Known RBP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	MRS2	Q9HD23	443 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	CNTN3	Q9P232	1028 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	CTSH	P09668	335 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	FURIN	P09958	794 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	MSL1	Q68DK7	614 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	FMR1NB	Q8N0W7	255 aa	Predicted RBP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	EPS8L3	Q8TE67	593 aa	Known RBP	5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SNX29	Q8TEQ0	813 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	NUDT8	Q8WV74	236 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	CHRD	Q9H2X0	955 aa		5.76	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SASH3	O75995	380 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	TARS	P26639	723 aa	Known RBP	5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ADGRE1	Q14246	886 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	PERM1	Q5SV97	790 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	C9orf131	Q5VYM1	1079 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	PI16	Q6UXB8	463 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	KRT25	Q7Z3Z0	450 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	NLRP13	Q86W25	1043 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	C1orf127	Q8N9H9	656 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	RBSN	Q9H1K0	784 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	VTI1B	Q9UEU0	232 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	PHACTR2	O75167	634 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	CPB1	P15086	417 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	METTL16	Q86W50	562 aa	Known RBP	5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	WFDC8	Q8IUA0	241 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	OSBPL7	Q9BZF2	842 aa		5.75	□□□□□ -1.49
EFCAB13-208	ENST00000520776	FAM229A	H3BQW9	127 aa		5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	EREG	O14944	169 aa		5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	POLR3D	P05423	398 aa	Predicted RBP	5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	GRIK5	Q16478	980 aa		5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	TXNRD3	Q86VQ6	643 aa		5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	MAP4K3	Q8IVH8	894 aa		5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ABI2	Q9NYB9	513 aa	Predicted RBP	5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	5.74	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ZBTB42	B2RXF5	422 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	ITGAE	P38570	1179 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	FANCC	Q00597	558 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	DOC2B	Q14184	412 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	MBTPS1	Q14703	1052 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	FBXO11	Q86XK2	927 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	GALNT12	Q8IXK2	581 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SPG7	Q9UQ90	795 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	LOC102724428	A0A0B4J2F2	783 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	GHRH	P01286	108 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SELP	P16109	830 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	EIF2AK2	P19525	551 aa	Known RBP	5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	SIK1	P57059	783 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	RAD51AP2	Q09MP3	1159 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	GRIK4	Q16099	956 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	RSPO4	Q2I0M5	234 aa	Predicted RBP	5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	NKAPL	Q5M9Q1	402 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	C8orf37	Q96NL8	207 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	MUC3B	Q9H195	1237 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	TPSG1	Q9NRR2	321 aa		5.73	□□□□□ -1.49
EFCAB13-208	ENST00000520776	GIPC1	O14908	333 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms