RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MIEF2Q96C03 454 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 FAXDC2Q96IV6 333 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 ZSWIM4Q9H7M6 989 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 CFAP45Q9UL16 551 aa15.64■□□□□ 0.09
PABPC1-208ENST00000519004 ERLIN1O75477 346 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 CEBPZQ03701 1054 aaKnown RBP15.63■□□□□ 0.09
PABPC1-208ENST00000519004 FAM160A1Q05DH4 1040 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 GOLGA8FQ08AF8 430 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 GOLGA8DPQ0D2H9 430 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 NCAPHQ15003 741 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 NECTIN1Q15223 517 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 SRGAP1Q7Z6B7 1085 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 ABCC1P33527 1531 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 POTEB2H3BUK9 544 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 CUTAO60888 179 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 GBP6Q6ZN66 633 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 TBC1D22AQ8WUA7 517 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 DDX11Q96FC9 970 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 RCOR1Q9UKL0 485 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 KIF20BQ96Q89 1820 aa15.63■□□□□ 0.09
PABPC1-208ENST00000519004 FRMPD1Q5SYB0 1578 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 IL13P35225 146 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 FANCCQ00597 558 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 JPH2Q9BR39 696 aaPredicted RBP15.62■□□□□ 0.09
PABPC1-208ENST00000519004 FTOQ9C0B1 505 aaKnown RBP eCLIP15.62■□□□□ 0.09
PABPC1-208ENST00000519004 FAM169AQ9Y6X4 670 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 GPTP24298 496 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 SCRN1Q12765 414 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 AFAP1L1Q8TED9 768 aa15.62■□□□□ 0.09
PABPC1-208ENST00000519004 ZFYVE16Q7Z3T8 1539 aa15.61■□□□□ 0.09
PABPC1-208ENST00000519004 GOLGA6L9A6NEM1 432 aa15.61■□□□□ 0.09
PABPC1-208ENST00000519004 LRRIQ3A6PVS8 624 aaPredicted RBP15.61■□□□□ 0.09
PABPC1-208ENST00000519004 ARHGAP6O43182 974 aa15.61■□□□□ 0.09
PABPC1-208ENST00000519004 RNF40O75150 1001 aa15.61■□□□□ 0.09
PABPC1-208ENST00000519004 PRPF38AQ8NAV1 312 aaKnown RBP15.61■□□□□ 0.09
PABPC1-208ENST00000519004 GIMAP7Q8NHV1 300 aa15.61■□□□□ 0.09
PABPC1-208ENST00000519004 BRF1Q92994 677 aa15.61■□□□□ 0.09
PABPC1-208ENST00000519004 CHL1O00533 1208 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 KIF3CO14782 793 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 JAK2O60674 1132 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 PRPF6O94906 941 aaKnown RBP15.6■□□□□ 0.09
PABPC1-208ENST00000519004 ELF1P32519 619 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 SKIDA1Q1XH10 827 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 JMYQ8N9B5 988 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 MCM8Q9UJA3 840 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 VSNL1P62760 191 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 FSIP1Q8NA03 581 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 DPF2Q92785 391 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 TCEANC2Q96MN5 208 aa15.6■□□□□ 0.09
PABPC1-208ENST00000519004 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
PABPC1-208ENST00000519004 WDHD1O75717 1129 aaPredicted RBP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 SYF2O95926 243 aaKnown RBP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 DDR1Q08345 913 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 TOB2Q14106 344 aaPredicted RBP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 HSD3B7Q9H2F3 369 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 PUF60Q9UHX1 559 aaKnown RBP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 MYH15Q9Y2K3 1946 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 SHOX2O60902 331 aaPredicted RBP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 CCT5P48643 541 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 STK3Q13188 491 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 CCDC12Q8WUD4 166 aaPredicted RBP15.59■□□□□ 0.09
PABPC1-208ENST00000519004 FMNL2Q96PY5 1086 aa15.59■□□□□ 0.09
PABPC1-208ENST00000519004 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.09
PABPC1-208ENST00000519004 LMOD1P29536 600 aaPredicted RBP15.58■□□□□ 0.09
PABPC1-208ENST00000519004 NEDD9Q14511 834 aa15.58■□□□□ 0.09
PABPC1-208ENST00000519004 TOGARAM2Q6ZUX3 1019 aa15.58■□□□□ 0.09
PABPC1-208ENST00000519004 FMR1NBQ8N0W7 255 aaPredicted RBP15.58■□□□□ 0.09
PABPC1-208ENST00000519004 RBM28Q9NW13 759 aaKnown RBP15.58■□□□□ 0.09
PABPC1-208ENST00000519004 RBM8AQ9Y5S9 174 aaKnown RBP15.58■□□□□ 0.09
PABPC1-208ENST00000519004 NEDD4P46934 1319 aa15.58■□□□□ 0.09
PABPC1-208ENST00000519004 MROH1Q8NDA8 1641 aa15.58■□□□□ 0.08
PABPC1-208ENST00000519004 AARSP49588 968 aaKnown RBP eCLIP15.58■□□□□ 0.08
PABPC1-208ENST00000519004 INHBEP58166 350 aa15.58■□□□□ 0.08
PABPC1-208ENST00000519004 BIRC2Q13490 618 aa15.58■□□□□ 0.08
PABPC1-208ENST00000519004 ANKRD1Q15327 319 aa15.58■□□□□ 0.08
PABPC1-208ENST00000519004 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
PABPC1-208ENST00000519004 KIAA1468Q9P260 1216 aa15.58■□□□□ 0.08
PABPC1-208ENST00000519004 CHGAP10645 457 aaKnown RBP15.57■□□□□ 0.08
PABPC1-208ENST00000519004 VSTM4Q8IW00 320 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 RUFY2Q8WXA3 655 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 ACBD3Q9H3P7 528 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 INPP5BP32019 993 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 SETQ01105 290 aaPredicted RBP15.57■□□□□ 0.08
PABPC1-208ENST00000519004 CEP112Q8N8E3 955 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 CABS1Q96KC9 395 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 USP28Q96RU2 1077 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
PABPC1-208ENST00000519004 CDHR2Q9BYE9 1310 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 ABCC6O95255 1503 aa15.57■□□□□ 0.08
PABPC1-208ENST00000519004 H3BQV1 296 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 EBAG9O00559 213 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 PSMA5P28066 241 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 IFFO2Q5TF58 517 aa15.56■□□□□ 0.08
PABPC1-208ENST00000519004 ZKSCAN4Q969J2 545 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms