RNA–Protein interactions for RNA: ENST00000517391.5

CPNE3-202, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-202ENST00000517391 FGFR3P22607 806 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 CES1P23141 567 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 CTBSQ01459 385 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 CCINQ13939 588 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 RSPO4Q2I0M5 234 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-202ENST00000517391 NAALADL2Q58DX5 795 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 C9orf131Q5VYM1 1079 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 METTL16Q86W50 562 aaKnown RBP8.42□□□□□ -1.06
CPNE3-202ENST00000517391 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 EFCC1Q9HA90 598 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 FAM8A1Q9UBU6 413 aa8.42□□□□□ -1.06
CPNE3-202ENST00000517391 CTSHP09668 335 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 MAPTP10636 758 aaKnown RBP8.41□□□□□ -1.06
CPNE3-202ENST00000517391 SLCO4C1Q6ZQN7 724 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 C1orf127Q8N9H9 656 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 SREK1Q8WXA9 508 aaKnown RBP8.41□□□□□ -1.06
CPNE3-202ENST00000517391 DRC1Q96MC2 740 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 TGIF2Q9GZN2 237 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 CNTN3Q9P232 1028 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 HCN2Q9UL51 889 aa8.41□□□□□ -1.06
CPNE3-202ENST00000517391 C2CD2LO14523 706 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 EFSO43281 561 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-202ENST00000517391 BMP4P12644 408 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 TNP2Q05952 138 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 BTBD6Q96KE9 485 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 CHRDQ9H2X0 955 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 NPHS2Q9NP85 383 aa8.4□□□□□ -1.06
CPNE3-202ENST00000517391 USP31Q70CQ4 1352 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 EREGO14944 169 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 SASH3O75995 380 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 EDN3P14138 238 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 CD33P20138 364 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 DGKGP49619 791 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 RAD51AP2Q09MP3 1159 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 SF3A1Q15459 793 aaKnown RBP8.39□□□□□ -1.07
CPNE3-202ENST00000517391 TAF1CQ15572 869 aaPredicted RBP8.39□□□□□ -1.07
CPNE3-202ENST00000517391 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 GSX2Q9BZM3 304 aa8.39□□□□□ -1.07
CPNE3-202ENST00000517391 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
CPNE3-202ENST00000517391 SFSWAPQ12872 951 aaKnown RBP8.38□□□□□ -1.07
CPNE3-202ENST00000517391 KIAA0319Q5VV43 1072 aa8.38□□□□□ -1.07
CPNE3-202ENST00000517391 OR13H1Q8NG92 308 aa8.38□□□□□ -1.07
CPNE3-202ENST00000517391 KRTAP4-7Q9BYR0 210 aa8.38□□□□□ -1.07
CPNE3-202ENST00000517391 BCO2Q9BYV7 579 aa8.38□□□□□ -1.07
CPNE3-202ENST00000517391 STRN4Q9NRL3 753 aa8.38□□□□□ -1.07
CPNE3-202ENST00000517391 TRAK1Q9UPV9 953 aa8.38□□□□□ -1.07
CPNE3-202ENST00000517391 ST13P50502 369 aaKnown RBP8.37□□□□□ -1.07
CPNE3-202ENST00000517391 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
CPNE3-202ENST00000517391 NXPE4Q6UWF7 544 aa8.37□□□□□ -1.07
CPNE3-202ENST00000517391 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
CPNE3-202ENST00000517391 CCSER2Q9H7U1 834 aa8.37□□□□□ -1.07
CPNE3-202ENST00000517391 MARK1Q9P0L2 795 aa8.37□□□□□ -1.07
CPNE3-202ENST00000517391 GGA1Q9UJY5 639 aa8.37□□□□□ -1.07
CPNE3-202ENST00000517391 USP17L7P0C7H9 530 aa8.36□□□□□ -1.07
CPNE3-202ENST00000517391 RARAP10276 462 aa8.36□□□□□ -1.07
CPNE3-202ENST00000517391 TARSP26639 723 aaKnown RBP8.36□□□□□ -1.07
CPNE3-202ENST00000517391 HS2ST1Q7LGA3 356 aa8.36□□□□□ -1.07
CPNE3-202ENST00000517391 DYRK3O43781 588 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 MMP20O60882 483 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 MAP3K6O95382 1288 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 PSAPP07602 524 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 EPXP11678 715 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 GSTT1P30711 240 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 SOX18P35713 384 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 GNL2Q13823 731 aaKnown RBP8.35□□□□□ -1.07
CPNE3-202ENST00000517391 KRT25Q7Z3Z0 450 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 SLC43A3Q8NBI5 491 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 EHD4Q9H223 541 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
CPNE3-202ENST00000517391 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.35□□□□□ -1.07
CPNE3-202ENST00000517391 EIF4G1Q04637 1599 aaKnown RBP8.35□□□□□ -1.07
CPNE3-202ENST00000517391 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
CPNE3-202ENST00000517391 LOC105371045A0A1W2PR82 267 aa8.34□□□□□ -1.07
CPNE3-202ENST00000517391 GRM2Q14416 872 aa8.34□□□□□ -1.07
CPNE3-202ENST00000517391 ZNF654Q8IZM8 581 aa8.34□□□□□ -1.07
CPNE3-202ENST00000517391 TLR7Q9NYK1 1049 aaKnown RBP8.34□□□□□ -1.07
CPNE3-202ENST00000517391 DDX41Q9UJV9 622 aaKnown RBP8.34□□□□□ -1.07
CPNE3-202ENST00000517391 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
CPNE3-202ENST00000517391 A0A1W2PP55 124 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 COBLO75128 1261 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-202ENST00000517391 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
CPNE3-202ENST00000517391 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 HYAL2Q12891 473 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 NEUROD1Q13562 356 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 LRP8Q14114 963 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 ZFYVE1Q9HBF4 777 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 GGT7Q9UJ14 662 aa8.33□□□□□ -1.08
CPNE3-202ENST00000517391 HOXD8P13378 290 aaPredicted RBP8.32□□□□□ -1.08
CPNE3-202ENST00000517391 PLAURQ03405 335 aa8.32□□□□□ -1.08
CPNE3-202ENST00000517391 FAM182BQ5T319 152 aa8.32□□□□□ -1.08
CPNE3-202ENST00000517391 LCE1DQ5T752 114 aa8.32□□□□□ -1.08
CPNE3-202ENST00000517391 MEI1Q5TIA1 1274 aa8.32□□□□□ -1.08
CPNE3-202ENST00000517391 PRPF40BQ6NWY9 871 aaKnown RBP8.32□□□□□ -1.08
CPNE3-202ENST00000517391 USP48Q86UV5 1035 aa8.32□□□□□ -1.08
CPNE3-202ENST00000517391 UBXN4Q92575 508 aa8.32□□□□□ -1.08
CPNE3-202ENST00000517391 CAPN10Q9HC96 672 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms