RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 CRY2Q49AN0 593 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 PSMD1Q99460 953 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
CDC42SE2-212ENST00000515533 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 PASKQ96RG2 1323 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 EPHX2P34913 555 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 EIF6P56537 245 aaKnown RBP11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 GPC2Q8N158 579 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 PRR14Q9BWN1 585 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 SNED1Q8TER0 1413 aa11.69□□□□□ -0.54
CDC42SE2-212ENST00000515533 CNTNAP1P78357 1384 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 UBN2Q6ZU65 1347 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 FZD9O00144 591 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 TRIM67Q6ZTA4 783 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 PPP1R42Q7Z4L9 355 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 TMX4Q9H1E5 349 aaPredicted RBP11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 TSPYL4Q9UJ04 414 aa11.68□□□□□ -0.54
CDC42SE2-212ENST00000515533 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 LMOD1P29536 600 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 SUSD4Q5VX71 490 aa11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 GIGYF2Q6Y7W6 1299 aaKnown RBP11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 KCNV2Q8TDN2 545 aa11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 EMID1Q96A84 441 aaPredicted RBP11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 GJA3Q9Y6H8 435 aa11.67□□□□□ -0.54
CDC42SE2-212ENST00000515533 COL4A5P29400 1685 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 TCERG1O14776 1098 aaKnown RBP11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 PPEF1O14829 653 aaPredicted RBP11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 NTSR2O95665 410 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 PARP10Q53GL7 1025 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 BLOC1S3Q6QNY0 202 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 ZNF34Q8IZ26 560 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 AIDAQ96BJ3 306 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 NLRP3Q96P20 1036 aa11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
CDC42SE2-212ENST00000515533 SLC19A1P41440 591 aa11.65□□□□□ -0.54
CDC42SE2-212ENST00000515533 RIPK4P57078 832 aa11.65□□□□□ -0.54
CDC42SE2-212ENST00000515533 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
CDC42SE2-212ENST00000515533 MAP1SQ66K74 1059 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE2-212ENST00000515533 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
CDC42SE2-212ENST00000515533 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
CDC42SE2-212ENST00000515533 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
CDC42SE2-212ENST00000515533 NIM1KQ8IY84 436 aa11.64□□□□□ -0.55
CDC42SE2-212ENST00000515533 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
CDC42SE2-212ENST00000515533 BABAM1Q9NWV8 329 aa11.64□□□□□ -0.55
CDC42SE2-212ENST00000515533 FOXN1O15353 648 aa11.63□□□□□ -0.55
CDC42SE2-212ENST00000515533 PPIP5K2O43314 1243 aa11.63□□□□□ -0.55
CDC42SE2-212ENST00000515533 VEGFBP49765 207 aa11.63□□□□□ -0.55
CDC42SE2-212ENST00000515533 RALBP1Q15311 655 aa11.63□□□□□ -0.55
CDC42SE2-212ENST00000515533 HSP90AB3PQ58FF7 597 aa11.63□□□□□ -0.55
CDC42SE2-212ENST00000515533 ABT1Q9ULW3 272 aaKnown RBP11.63□□□□□ -0.55
CDC42SE2-212ENST00000515533 ABCC4O15439 1325 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 RASSF10A6NK89 507 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 TLL1O43897 1013 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 ANXA1P04083 346 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 TMPOP42166 694 aaKnown RBP11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 CTCFP49711 727 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 SCNN1DP51172 638 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 DEFB115Q30KQ5 88 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 LRRC37AA6NMS7 1700 aa11.62□□□□□ -0.55
CDC42SE2-212ENST00000515533 EPS15P42566 896 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 AOC3Q16853 763 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 PROSER3Q2NL68 480 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 USP50Q70EL3 339 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 VPS33BQ9H267 617 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 PRDM10Q9NQV6 1147 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 ATP6V0A2Q9Y487 856 aa11.61□□□□□ -0.55
CDC42SE2-212ENST00000515533 THSD7BQ9C0I4 1608 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 DPP8Q6V1X1 898 aaPredicted RBP11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 TRMT112Q9UI30 125 aaKnown RBP11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
CDC42SE2-212ENST00000515533 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
CDC42SE2-212ENST00000515533 MYH3P11055 1940 aa11.59□□□□□ -0.55
CDC42SE2-212ENST00000515533 BBOX1O75936 387 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms