RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 RALGAPBQ86X10 1494 aa16.51■□□□□ 0.23
TRIO-222ENST00000515144 RXRBP28702 533 aa16.51■□□□□ 0.23
TRIO-222ENST00000515144 PTPDC1A2A3K4 754 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 MRPL50Q8N5N7 158 aaKnown RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 BCCIPQ9P287 314 aaKnown RBP eCLIP16.5■□□□□ 0.237e-7■■■□□ 15.9
TRIO-222ENST00000515144 NCBP1Q09161 790 aaKnown RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 CHMP2AO43633 222 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 COL17A1Q9UMD9 1497 aaPredicted RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 H0YHG0 523 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 CETN2P41208 172 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 CETN1Q12798 172 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 TAF12Q16514 161 aa16.5■□□□□ 0.23
TRIO-222ENST00000515144 HIBADHP31937 336 aaKnown RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 ATF5Q9Y2D1 282 aaPredicted RBP16.5■□□□□ 0.23
TRIO-222ENST00000515144 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 TMCO5BA8MYB1 307 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 SSFA2P28290 1259 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 ARID5AQ03989 594 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 TSPYL1Q9H0U9 437 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 ARMT1Q9H993 441 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 GSTTP1A0A1W2PQM5 241 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 LMAN1P49257 510 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 VPS36Q86VN1 386 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 CNNM2Q9H8M5 875 aa16.49■□□□□ 0.23
TRIO-222ENST00000515144 G2E3Q7L622 706 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
TRIO-222ENST00000515144 C6orf50Q9HD87 102 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 MBD4O95243 580 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 TRMT1Q9NXH9 659 aaKnown RBP16.48■□□□□ 0.23
TRIO-222ENST00000515144 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 H7C1D1 291 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 CCDC112Q8NEF3 446 aa16.48■□□□□ 0.23
TRIO-222ENST00000515144 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
TRIO-222ENST00000515144 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 PLCG2P16885 1265 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 STX6O43752 255 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 ANO10Q9NW15 660 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 LTKP29376 864 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 A0A1B0GUL7 405 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
TRIO-222ENST00000515144 GJC1P36383 396 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 PLCD4Q9BRC7 762 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 GRPEL1Q9HAV7 217 aa16.47■□□□□ 0.23
TRIO-222ENST00000515144 CASQ1P31415 396 aa16.46■□□□□ 0.23
TRIO-222ENST00000515144 SPOUT1Q5T280 376 aaKnown RBP16.46■□□□□ 0.23
TRIO-222ENST00000515144 ERMNQ8TAM6 284 aa16.46■□□□□ 0.23
TRIO-222ENST00000515144 SMCR8Q8TEV9 937 aaPredicted RBP16.46■□□□□ 0.23
TRIO-222ENST00000515144 RBM27Q9P2N5 1060 aaKnown RBP16.46■□□□□ 0.23
TRIO-222ENST00000515144 CNGA1P29973 690 aa16.46■□□□□ 0.23
TRIO-222ENST00000515144 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
TRIO-222ENST00000515144 MRVI1Q9Y6F6 885 aa16.46■□□□□ 0.23
TRIO-222ENST00000515144 IVNS1ABPQ9Y6Y0 642 aa16.46■□□□□ 0.23
TRIO-222ENST00000515144 DPY19L2Q6NUT2 758 aa16.46■□□□□ 0.22
TRIO-222ENST00000515144 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.22
TRIO-222ENST00000515144 KIFC2Q96AC6 838 aa16.46■□□□□ 0.22
TRIO-222ENST00000515144 TRIM47Q96LD4 638 aa16.46■□□□□ 0.22
TRIO-222ENST00000515144 SCNN1DP51172 638 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 RSPH6AQ9H0K4 717 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 PDE8AO60658 829 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 MRPS9P82933 396 aaKnown RBP16.45■□□□□ 0.22
TRIO-222ENST00000515144 MKRN3Q13064 507 aaKnown RBP16.45■□□□□ 0.22
TRIO-222ENST00000515144 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 GTF2IP78347 998 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
TRIO-222ENST00000515144 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
TRIO-222ENST00000515144 CCDC183Q5T5S1 534 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
TRIO-222ENST00000515144 TGFBRAP1Q8WUH2 860 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 ARHGEF10LQ9HCE6 1279 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 TCP10L2B9ZVM9 353 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 NOP56O00567 594 aaKnown RBP16.44■□□□□ 0.22
TRIO-222ENST00000515144 NUCB1Q02818 461 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 PUM3Q15397 648 aaKnown RBP16.44■□□□□ 0.22
TRIO-222ENST00000515144 SCAND2PQ9GZW5 306 aaPredicted RBP16.44■□□□□ 0.22
TRIO-222ENST00000515144 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 PDE1AP54750 535 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 C2CD5Q86YS7 1000 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 HMG20BQ9P0W2 317 aa16.44■□□□□ 0.22
TRIO-222ENST00000515144 B4E1Z4 1266 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 FAM13AO94988 1023 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 ATP8B2P98198 1209 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 CDCA7Q9BWT1 371 aaPredicted RBP16.43■□□□□ 0.22
TRIO-222ENST00000515144 ARHGEF10O15013 1369 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 ALDH1B1P30837 517 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 KRT2P35908 639 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 ZBTB9Q96C00 473 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms