RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
CDK7-210ENST00000513629 ZNF34Q8IZ26 560 aa12.15□□□□□ -0.46
CDK7-210ENST00000513629 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
CDK7-210ENST00000513629 IL27Q8NEV9 243 aa12.15□□□□□ -0.46
CDK7-210ENST00000513629 LDHDQ86WU2 507 aa12.14□□□□□ -0.47
CDK7-210ENST00000513629 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
CDK7-210ENST00000513629 TAF1DQ9H5J8 278 aaPredicted RBP12.14□□□□□ -0.47
CDK7-210ENST00000513629 RNF123Q5XPI4 1314 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 COL4A5P29400 1685 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
CDK7-210ENST00000513629 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 DDRGK1Q96HY6 314 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 PSMD1Q99460 953 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 SCN4AP35499 1836 aa12.13□□□□□ -0.47
CDK7-210ENST00000513629 FZD9O00144 591 aa12.12□□□□□ -0.47
CDK7-210ENST00000513629 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
CDK7-210ENST00000513629 PPEF1O14829 653 aaPredicted RBP12.12□□□□□ -0.47
CDK7-210ENST00000513629 HOXA10P31260 410 aaPredicted RBP12.12□□□□□ -0.47
CDK7-210ENST00000513629 WDR43Q15061 677 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDK7-210ENST00000513629 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
CDK7-210ENST00000513629 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
CDK7-210ENST00000513629 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
CDK7-210ENST00000513629 RBM17Q96I25 401 aaKnown RBP12.12□□□□□ -0.47
CDK7-210ENST00000513629 UTP14AQ9BVJ6 771 aaKnown RBP12.12□□□□□ -0.47
CDK7-210ENST00000513629 HACL1Q9UJ83 578 aa12.12□□□□□ -0.47
CDK7-210ENST00000513629 HSPA1AP0DMV8 641 aaKnown RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 HSPA1BP0DMV9 641 aaKnown RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 EPHX2P34913 555 aa12.11□□□□□ -0.47
CDK7-210ENST00000513629 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 COL13A1Q5TAT6 717 aaPredicted RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 XAGE3Q8WTP9 111 aa12.11□□□□□ -0.47
CDK7-210ENST00000513629 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
CDK7-210ENST00000513629 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
CDK7-210ENST00000513629 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
CDK7-210ENST00000513629 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
CDK7-210ENST00000513629 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 GPC2Q8N158 579 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 LARGE2Q8N3Y3 721 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 NLRP3Q96P20 1036 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 GJA3Q9Y6H8 435 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 ABCC4O15439 1325 aa12.1□□□□□ -0.47
CDK7-210ENST00000513629 DDX11L8A8MPP1 907 aa12.09□□□□□ -0.47
CDK7-210ENST00000513629 CHL1O00533 1208 aa12.09□□□□□ -0.47
CDK7-210ENST00000513629 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
CDK7-210ENST00000513629 HSP90AB3PQ58FF7 597 aa12.09□□□□□ -0.47
CDK7-210ENST00000513629 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
CDK7-210ENST00000513629 CDAN1Q8IWY9 1227 aa12.09□□□□□ -0.47
CDK7-210ENST00000513629 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
CDK7-210ENST00000513629 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
CDK7-210ENST00000513629 CNTNAP1P78357 1384 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 PPIP5K2O43314 1243 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
CDK7-210ENST00000513629 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 HDGFL1Q5TGJ6 251 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
CDK7-210ENST00000513629 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 DDX21Q9NR30 783 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDK7-210ENST00000513629 ADAMTS8Q9UP79 889 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
CDK7-210ENST00000513629 ITGBL1O95965 494 aaPredicted RBP12.07□□□□□ -0.48
CDK7-210ENST00000513629 CD46P15529 392 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
CDK7-210ENST00000513629 SCNN1DP51172 638 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 TCIRG1Q13488 830 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 AOC3Q16853 763 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 MAP1SQ66K74 1059 aaPredicted RBP12.07□□□□□ -0.48
CDK7-210ENST00000513629 NIM1KQ8IY84 436 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 TMX4Q9H1E5 349 aaPredicted RBP12.07□□□□□ -0.48
CDK7-210ENST00000513629 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
CDK7-210ENST00000513629 ATP6V0A2Q9Y487 856 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 LAMB2P55268 1798 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
CDK7-210ENST00000513629 TMEM88BA6NKF7 163 aa12.06□□□□□ -0.48
CDK7-210ENST00000513629 CNTROBQ8N137 903 aa12.06□□□□□ -0.48
CDK7-210ENST00000513629 HOXB7P09629 217 aa12.05□□□□□ -0.48
CDK7-210ENST00000513629 EPS15P42566 896 aa12.05□□□□□ -0.48
CDK7-210ENST00000513629 TNS4Q8IZW8 715 aa12.05□□□□□ -0.48
CDK7-210ENST00000513629 PRKRIP1Q9H875 184 aaPredicted RBP12.05□□□□□ -0.48
CDK7-210ENST00000513629 GRAPQ13588 217 aa12.04□□□□□ -0.48
CDK7-210ENST00000513629 DPP8Q6V1X1 898 aaPredicted RBP12.04□□□□□ -0.48
CDK7-210ENST00000513629 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
CDK7-210ENST00000513629 SUPT20HQ8NEM7 779 aa12.04□□□□□ -0.48
CDK7-210ENST00000513629 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
CDK7-210ENST00000513629 GRAPLQ8TC17 118 aaPredicted RBP12.04□□□□□ -0.48
CDK7-210ENST00000513629 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
CDK7-210ENST00000513629 MBIPQ9NS73 344 aa12.04□□□□□ -0.48
CDK7-210ENST00000513629 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
CDK7-210ENST00000513629 ATP5J2-PTCD1G3V325 749 aa12.03□□□□□ -0.48
CDK7-210ENST00000513629 BBOX1O75936 387 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms