RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
PDCD6-209ENST00000512466 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
PDCD6-209ENST00000512466 ORC3Q9UBD5 711 aaPredicted RBP12.41□□□□□ -0.42
PDCD6-209ENST00000512466 SNW1Q13573 536 aaKnown RBP12.41□□□□□ -0.42
PDCD6-209ENST00000512466 SLC3A2P08195 630 aaKnown RBP12.41□□□□□ -0.42
PDCD6-209ENST00000512466 GOLGA8FQ08AF8 430 aa12.41□□□□□ -0.42
PDCD6-209ENST00000512466 GOLGA8DPQ0D2H9 430 aa12.41□□□□□ -0.42
PDCD6-209ENST00000512466 SPECC1Q5M775 1068 aa12.41□□□□□ -0.42
PDCD6-209ENST00000512466 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
PDCD6-209ENST00000512466 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
PDCD6-209ENST00000512466 SOS2Q07890 1332 aaPredicted RBP12.41□□□□□ -0.42
PDCD6-209ENST00000512466 NWD1Q149M9 1564 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 UBXN4Q92575 508 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 MCMDC2Q4G0Z9 681 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 RASSF8Q8NHQ8 419 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 BTG4Q9NY30 223 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 CEP126Q9P2H0 1117 aa12.4□□□□□ -0.42
PDCD6-209ENST00000512466 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
PDCD6-209ENST00000512466 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.42
PDCD6-209ENST00000512466 SSH2Q76I76 1423 aa12.4□□□□□ -0.43
PDCD6-209ENST00000512466 KLF18A0A0U1RQI7 1052 aa12.4□□□□□ -0.43
PDCD6-209ENST00000512466 USP27XA6NNY8 438 aa12.4□□□□□ -0.43
PDCD6-209ENST00000512466 RNMTO43148 476 aaKnown RBP12.4□□□□□ -0.43
PDCD6-209ENST00000512466 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.43
PDCD6-209ENST00000512466 CPLX2Q6PUV4 134 aaKnown RBP12.4□□□□□ -0.43
PDCD6-209ENST00000512466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.4□□□□□ -0.43
PDCD6-209ENST00000512466 NALCNQ8IZF0 1738 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 FMN2Q9NZ56 1722 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 NECTIN1Q15223 517 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 TEX35Q5T0J7 233 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 NUP133Q8WUM0 1156 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
PDCD6-209ENST00000512466 OLFM4Q6UX06 510 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 MAP4K1Q92918 833 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 GPTP24298 496 aa12.39□□□□□ -0.43
PDCD6-209ENST00000512466 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
PDCD6-209ENST00000512466 AKAP4Q5JQC9 854 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 EPHA10Q5JZY3 1008 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 CYP21A2P08686 494 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 SCRN1Q12765 414 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 IGSF1Q8N6C5 1336 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 ERCC6LQ2NKX8 1250 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
PDCD6-209ENST00000512466 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
PDCD6-209ENST00000512466 POLA2Q14181 598 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 C8orf37Q96NL8 207 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 RGPD8O14715 1765 aaPredicted RBP12.37□□□□□ -0.43
PDCD6-209ENST00000512466 USP32Q8NFA0 1604 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 CRB1P82279 1406 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 STRCQ7RTU9 1775 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 TAF5LO75529 589 aa12.37□□□□□ -0.43
PDCD6-209ENST00000512466 MRPS27Q92552 414 aaKnown RBP12.37□□□□□ -0.43
PDCD6-209ENST00000512466 ZNF496Q96IT1 587 aaPredicted RBP12.37□□□□□ -0.43
PDCD6-209ENST00000512466 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
PDCD6-209ENST00000512466 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
PDCD6-209ENST00000512466 MYL10Q9BUA6 226 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
PDCD6-209ENST00000512466 CNNM1Q9NRU3 951 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 HMG20BQ9P0W2 317 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 AOX1Q06278 1338 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 TOB2Q14106 344 aaPredicted RBP12.36□□□□□ -0.43
PDCD6-209ENST00000512466 IMMTQ16891 758 aaKnown RBP12.36□□□□□ -0.43
PDCD6-209ENST00000512466 TAF3Q5VWG9 929 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
PDCD6-209ENST00000512466 PAG1Q9NWQ8 432 aa12.36□□□□□ -0.43
PDCD6-209ENST00000512466 A0A0G2JLW4 131 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 TIGD1Q96MW7 591 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 ARGLU1Q9NWB6 273 aaPredicted RBP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 NCBP1Q09161 790 aaKnown RBP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 LRRC8AQ8IWT6 810 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 TM6SF1Q9BZW5 370 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 XPO4Q9C0E2 1151 aaKnown RBP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 TOP1P11387 765 aaKnown RBP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 UBASH3AP57075 661 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 UTP14CQ5TAP6 766 aaKnown RBP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 ERBB3P21860 1342 aa12.35□□□□□ -0.43
PDCD6-209ENST00000512466 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
PDCD6-209ENST00000512466 GNG11P61952 73 aa12.34□□□□□ -0.43
PDCD6-209ENST00000512466 GCKRQ14397 625 aa12.34□□□□□ -0.43
PDCD6-209ENST00000512466 KRT222Q8N1A0 295 aa12.34□□□□□ -0.43
PDCD6-209ENST00000512466 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
PDCD6-209ENST00000512466 ZNF213O14771 459 aa12.34□□□□□ -0.43
PDCD6-209ENST00000512466 DHX16O60231 1041 aaKnown RBP12.34□□□□□ -0.43
PDCD6-209ENST00000512466 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
PDCD6-209ENST00000512466 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
PDCD6-209ENST00000512466 TMCO3Q6UWJ1 677 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms