RNA–Protein interactions for RNA: ENST00000511249.5

MATR3-216, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-216ENST00000511249 TBX22Q9Y458 520 aa7.04□□□□□ -1.28
MATR3-216ENST00000511249 PCDHGB7Q9Y5F8 929 aa7.04□□□□□ -1.28
MATR3-216ENST00000511249 RACK1P63244 317 aaKnown RBP7.03□□□□□ -1.28
MATR3-216ENST00000511249 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
MATR3-216ENST00000511249 MYO19Q96H55 970 aa7.03□□□□□ -1.28
MATR3-216ENST00000511249 ZSWIM4Q9H7M6 989 aa7.03□□□□□ -1.28
MATR3-216ENST00000511249 SCHIP1Q9P0W5 487 aaPredicted RBP7.03□□□□□ -1.28
MATR3-216ENST00000511249 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.03□□□□□ -1.28
MATR3-216ENST00000511249 AK5Q9Y6K8 562 aa7.03□□□□□ -1.28
MATR3-216ENST00000511249 SBNO2Q9Y2G9 1366 aa7.03□□□□□ -1.28
MATR3-216ENST00000511249 CDK2AP1O14519 115 aa7.02□□□□□ -1.29
MATR3-216ENST00000511249 EIF5BO60841 1220 aaKnown RBP7.02□□□□□ -1.29
MATR3-216ENST00000511249 NRG1Q02297 640 aaPredicted RBP7.02□□□□□ -1.29
MATR3-216ENST00000511249 EGFLAMQ63HQ2 1017 aa7.02□□□□□ -1.29
MATR3-216ENST00000511249 C8orf86Q6ZUL3 223 aa7.02□□□□□ -1.29
MATR3-216ENST00000511249 FBF1Q8TES7 1133 aa7.02□□□□□ -1.29
MATR3-216ENST00000511249 PAX4O43316 350 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 ELNP15502 786 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 SELPP16109 830 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 BRD2P25440 801 aaKnown RBP7.01□□□□□ -1.29
MATR3-216ENST00000511249 MZF1P28698 734 aaPredicted RBP7.01□□□□□ -1.29
MATR3-216ENST00000511249 PSMA6P60900 246 aaKnown RBP7.01□□□□□ -1.29
MATR3-216ENST00000511249 DNM1Q05193 864 aaKnown RBP7.01□□□□□ -1.29
MATR3-216ENST00000511249 BICDL1Q6ZP65 573 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 USP48Q86UV5 1035 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 NLGN1Q8N2Q7 840 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 TP53INP1Q96A56 240 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 LENG1Q96BZ8 264 aaPredicted RBP7.01□□□□□ -1.29
MATR3-216ENST00000511249 CSRNP1Q96S65 589 aa7.01□□□□□ -1.29
MATR3-216ENST00000511249 A6NJY4 79 aa7□□□□□ -1.29
MATR3-216ENST00000511249 PDGFAP04085 211 aa7□□□□□ -1.29
MATR3-216ENST00000511249 TXKP42681 527 aa7□□□□□ -1.29
MATR3-216ENST00000511249 USP5P45974 858 aa7□□□□□ -1.29
MATR3-216ENST00000511249 MTFR1Q15390 333 aa7□□□□□ -1.29
MATR3-216ENST00000511249 TRAPPC3LQ5T215 181 aa7□□□□□ -1.29
MATR3-216ENST00000511249 SOGA3Q5TF21 947 aa7□□□□□ -1.29
MATR3-216ENST00000511249 MCF2L2Q86YR7 1114 aa7□□□□□ -1.29
MATR3-216ENST00000511249 EDEM1Q92611 657 aa7□□□□□ -1.29
MATR3-216ENST00000511249 FRMD6Q96NE9 622 aa7□□□□□ -1.29
MATR3-216ENST00000511249 OSBPL2Q9H1P3 480 aa7□□□□□ -1.29
MATR3-216ENST00000511249 SRA1Q9HD15 236 aaKnown RBP7□□□□□ -1.29
MATR3-216ENST00000511249 CABP1Q9NZU7 370 aa7□□□□□ -1.29
MATR3-216ENST00000511249 RNF112Q9ULX5 631 aa7□□□□□ -1.29
MATR3-216ENST00000511249 ADH7P40394 386 aa6.99□□□□□ -1.29
MATR3-216ENST00000511249 PTPN12Q05209 780 aaKnown RBP6.99□□□□□ -1.29
MATR3-216ENST00000511249 ORC1Q13415 861 aa6.99□□□□□ -1.29
MATR3-216ENST00000511249 POTEAQ6S8J7 498 aa6.99□□□□□ -1.29
MATR3-216ENST00000511249 C20orf204Q6ZNR8 217 aa6.99□□□□□ -1.29
MATR3-216ENST00000511249 ETFBKMTQ8IXQ9 262 aa6.99□□□□□ -1.29
MATR3-216ENST00000511249 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
MATR3-216ENST00000511249 COL17A1Q9UMD9 1497 aaPredicted RBP6.98□□□□□ -1.29
MATR3-216ENST00000511249 A0A0A0MRY4 1105 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 EIF1AYO14602 144 aaKnown RBP6.98□□□□□ -1.29
MATR3-216ENST00000511249 COBLO75128 1261 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 FGRP09769 529 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.298e-10■■■■□ 19.9
MATR3-216ENST00000511249 EIF4BP23588 611 aaKnown RBP6.98□□□□□ -1.29
MATR3-216ENST00000511249 ZAP70P43403 619 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 NEUROD1Q13562 356 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 ZNF746Q6NUN9 644 aaPredicted RBP6.98□□□□□ -1.29
MATR3-216ENST00000511249 NGLY1Q96IV0 654 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
MATR3-216ENST00000511249 SPG7Q9UQ90 795 aa6.98□□□□□ -1.29
MATR3-216ENST00000511249 OPLAHO14841 1288 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 LILRB5O75023 590 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 STK10O94804 968 aaKnown RBP6.97□□□□□ -1.29
MATR3-216ENST00000511249 RAC1P63000 192 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 HS2ST1Q7LGA3 356 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 JAZF1Q86VZ6 243 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 VPS37DQ86XT2 251 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 GPATCH3Q96I76 525 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 SLC30A3Q99726 388 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 POLR3GLQ9BT43 218 aa6.97□□□□□ -1.29
MATR3-216ENST00000511249 EML1O00423 815 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 DGKZQ13574 1117 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 BMS1Q14692 1282 aaKnown RBP6.96□□□□□ -1.3
MATR3-216ENST00000511249 TCEAL1Q15170 157 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 SH3PXD2AQ5TCZ1 1133 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 FMNL2Q96PY5 1086 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 GGT7Q9UJ14 662 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 CHMP3Q9Y3E7 222 aa6.96□□□□□ -1.3
MATR3-216ENST00000511249 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
MATR3-216ENST00000511249 GJA8P48165 433 aa6.95□□□□□ -1.3
MATR3-216ENST00000511249 HIRAP54198 1017 aaPredicted RBP6.95□□□□□ -1.3
MATR3-216ENST00000511249 SFSWAPQ12872 951 aaKnown RBP6.95□□□□□ -1.3
MATR3-216ENST00000511249 C11orf91Q3C1V1 193 aa6.95□□□□□ -1.3
MATR3-216ENST00000511249 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.36e-7■□□□□ 11.3
MATR3-216ENST00000511249 DNAJC25Q9H1X3 360 aa6.95□□□□□ -1.3
MATR3-216ENST00000511249 SERTM1A2A2V5 107 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 RAB11FIP3O75154 756 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
MATR3-216ENST00000511249 TXLNAP40222 546 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 SPEM2Q0P670 501 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 RTN1Q16799 776 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.94□□□□□ -1.3
MATR3-216ENST00000511249 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
MATR3-216ENST00000511249 LRRC69Q6ZNQ3 347 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms