RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 NEK1Q96PY6 1258 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 SEC62Q99442 399 aaKnown RBP9.37□□□□□ -0.91
SSBP2-213ENST00000509743 BCL2L12Q9HB09 334 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 SEC31BQ9NQW1 1179 aa9.37□□□□□ -0.91
SSBP2-213ENST00000509743 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
SSBP2-213ENST00000509743 BRD1O95696 1058 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 RFC4P35249 363 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 MCAMP43121 646 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 KCNQ4P56696 695 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 CHRNDQ07001 517 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 SCARF1Q14162 830 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 UBE3CQ15386 1083 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 WASHC4Q2M389 1173 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 SLC27A3Q5K4L6 730 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 TRAPPC3LQ5T215 181 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 TPTE2Q6XPS3 522 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 CCDC129Q6ZRS4 1044 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
SSBP2-213ENST00000509743 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
SSBP2-213ENST00000509743 WDR33Q9C0J8 1336 aaKnown RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 LAMB2P55268 1798 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 M0R2C6 588 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 TRAK2O60296 914 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 CYP21A2P08686 494 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 HSPD1P10809 573 aaKnown RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 PHKA1P46020 1223 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 UBE4AQ14139 1066 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 BICDL1Q6ZP65 573 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 KRT27Q7Z3Y8 459 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 ILDR1Q86SU0 546 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 SPATA5Q8NB90 893 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 OSBP2Q969R2 916 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 GNL3LQ9NVN8 582 aaKnown RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 SRP68Q9UHB9 627 aaKnown RBP9.35□□□□□ -0.91
SSBP2-213ENST00000509743 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
SSBP2-213ENST00000509743 CPA1P15085 419 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 ADD2P35612 726 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 MAP3K12Q12852 859 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 IMMTQ16891 758 aaKnown RBP9.34□□□□□ -0.91
SSBP2-213ENST00000509743 SLC9C2Q5TAH2 1124 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 PI16Q6UXB8 463 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 CHMP4CQ96CF2 233 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 ANKRD2Q9GZV1 360 aa9.34□□□□□ -0.91
SSBP2-213ENST00000509743 PIH1D3Q9NQM4 214 aaKnown RBP9.34□□□□□ -0.91
SSBP2-213ENST00000509743 ZNF804BA4D1E1 1349 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 BTAF1O14981 1849 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 NUP98P52948 1817 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 SEMA3EO15041 775 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 IDH1O75874 414 aaKnown RBP9.33□□□□□ -0.92
SSBP2-213ENST00000509743 CHGBP05060 677 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 PDE6AP16499 860 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 PDCP20941 246 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 RASGRF1Q13972 1273 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 ZNF772Q68DY9 489 aaPredicted RBP9.33□□□□□ -0.92
SSBP2-213ENST00000509743 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
SSBP2-213ENST00000509743 TPCN1Q9ULQ1 816 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 ZDHHC9Q9Y397 364 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 ATP6V1DQ9Y5K8 247 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 C4BP0C0L5 1744 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 AK9Q5TCS8 1911 aa9.33□□□□□ -0.92
SSBP2-213ENST00000509743 ZMYM6O95789 1325 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 PDS5AQ29RF7 1337 aaKnown RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 COL24A1Q17RW2 1714 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 ARAP2Q8WZ64 1704 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 E7EWF7 191 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 ZBTB22O15209 634 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 NPHP1O15259 732 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 GPAA1O43292 621 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 LARGE1O95461 756 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 RBM6P78332 1123 aaKnown RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 FGD1P98174 961 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 PKP1Q13835 747 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 TOB2Q14106 344 aaPredicted RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 ME3Q16798 604 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 CAVIN4Q5BKX8 364 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 TMED8Q6PL24 325 aaPredicted RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 C3orf67Q6ZVT6 689 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 CCDC83Q8IWF9 413 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 PUS7LQ9H0K6 701 aaKnown RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 ISY1Q9ULR0 285 aaKnown RBP9.32□□□□□ -0.92
SSBP2-213ENST00000509743 MINPP1Q9UNW1 487 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 TAF6LQ9Y6J9 622 aa9.32□□□□□ -0.92
SSBP2-213ENST00000509743 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 LY75O60449 1722 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 DDX60Q8IY21 1712 aaKnown RBP9.31□□□□□ -0.92
SSBP2-213ENST00000509743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
SSBP2-213ENST00000509743 TCRBV5S4A2TA0A5A2 114 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 STX6O43752 255 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 IGSF3O75054 1194 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 PHF14O94880 888 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 ZSCAN22P10073 491 aaPredicted RBP9.31□□□□□ -0.92
SSBP2-213ENST00000509743 GNAT2P19087 354 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 GJB2P29033 226 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms