RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
NIPBL-206ENST00000509429 CDC27P30260 824 aa7.38□□□□□ -1.23
NIPBL-206ENST00000509429 ARSDP51689 593 aa7.38□□□□□ -1.23
NIPBL-206ENST00000509429 SPRED2Q7Z698 418 aa7.38□□□□□ -1.23
NIPBL-206ENST00000509429 ZAR1Q86SH2 424 aa7.38□□□□□ -1.23
NIPBL-206ENST00000509429 STK11IPQ8N1F8 1099 aa7.38□□□□□ -1.23
NIPBL-206ENST00000509429 CDC25BP30305 580 aa7.37□□□□□ -1.23
NIPBL-206ENST00000509429 ADMP35318 185 aa7.37□□□□□ -1.23
NIPBL-206ENST00000509429 SOX18P35713 384 aa7.37□□□□□ -1.23
NIPBL-206ENST00000509429 IRF5Q13568 498 aa7.37□□□□□ -1.23
NIPBL-206ENST00000509429 RELTQ969Z4 430 aa7.37□□□□□ -1.23
NIPBL-206ENST00000509429 TBC1D32Q96NH3 1257 aa7.37□□□□□ -1.23
NIPBL-206ENST00000509429 C2orf49Q9BVC5 232 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-206ENST00000509429 C21orf2O43822 256 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 RNASE1P07998 156 aaKnown RBP7.36□□□□□ -1.23
NIPBL-206ENST00000509429 VAC14Q08AM6 782 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 MLANAQ16655 118 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 KLHDC7BQ96G42 594 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 RUSC1Q9BVN2 902 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 SNRKQ9NRH2 765 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 TBC1D2BQ9UPU7 963 aa7.36□□□□□ -1.23
NIPBL-206ENST00000509429 MEGF11A6BM72 1044 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 FAM170BA6NMN3 283 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 EGFRP00533 1210 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 DUSP27Q5VZP5 1158 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 BCANQ96GW7 911 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 C20orf173Q96LM9 149 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 LACRTQ9GZZ8 138 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 LRRC4CQ9HCJ2 640 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 SEC31BQ9NQW1 1179 aa7.35□□□□□ -1.23
NIPBL-206ENST00000509429 MBNL3Q9NUK0 354 aaKnown RBP7.35□□□□□ -1.23
NIPBL-206ENST00000509429 MMP20O60882 483 aa7.34□□□□□ -1.23
NIPBL-206ENST00000509429 FUT4P22083 530 aa7.34□□□□□ -1.23
NIPBL-206ENST00000509429 SEMA3FQ13275 785 aa7.34□□□□□ -1.23
NIPBL-206ENST00000509429 M0R2N6 131 aa7.33□□□□□ -1.24
NIPBL-206ENST00000509429 PIK3CDO00329 1044 aa7.33□□□□□ -1.24
NIPBL-206ENST00000509429 TPCN2Q8NHX9 752 aa7.33□□□□□ -1.24
NIPBL-206ENST00000509429 PRKAG2Q9UGJ0 569 aa7.33□□□□□ -1.24
NIPBL-206ENST00000509429 HOXA5P20719 270 aa7.32□□□□□ -1.24
NIPBL-206ENST00000509429 LRRN4CLQ8ND94 238 aa7.32□□□□□ -1.24
NIPBL-206ENST00000509429 ATAD2Q6PL18 1390 aa7.32□□□□□ -1.24
NIPBL-206ENST00000509429 NCOA4Q13772 614 aa7.31□□□□□ -1.24
NIPBL-206ENST00000509429 SYDE1Q6ZW31 735 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-206ENST00000509429 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
NIPBL-206ENST00000509429 ADAMTS6Q9UKP5 1117 aa7.31□□□□□ -1.24
NIPBL-206ENST00000509429 ZNF503-AS2A6NEH8 195 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 XYLBO75191 536 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 SMNDC1O75940 238 aaKnown RBP eCLIP7.3□□□□□ -1.24
NIPBL-206ENST00000509429 CYP27A1Q02318 531 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 CEP135Q66GS9 1140 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
NIPBL-206ENST00000509429 GAS2L2Q8NHY3 880 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 GATA6Q92908 595 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 MISP3Q96FF7 219 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 PRM3Q9NNZ6 103 aa7.3□□□□□ -1.24
NIPBL-206ENST00000509429 ZBTB7BO15156 539 aaPredicted RBP7.29□□□□□ -1.24
NIPBL-206ENST00000509429 C1QTNF9P0C862 333 aa7.29□□□□□ -1.24
NIPBL-206ENST00000509429 ZSWIM9Q86XI8 627 aa7.29□□□□□ -1.24
NIPBL-206ENST00000509429 TRIM50Q86XT4 487 aa7.29□□□□□ -1.24
NIPBL-206ENST00000509429 MICAL2O94851 1124 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 EPHA1P21709 976 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 USP11P51784 963 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 BNIP3Q12983 259 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 PI4K2BQ8TCG2 481 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 FBLIM1Q8WUP2 373 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 TMPRSS5Q9H3S3 457 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
NIPBL-206ENST00000509429 RTCBQ9Y3I0 505 aaKnown RBP7.28□□□□□ -1.24
NIPBL-206ENST00000509429 SOX11P35716 441 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 NLRP12P59046 1061 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 ATP11AP98196 1134 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 TPRNQ4KMQ1 711 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 NUTM2GQ5VZR2 741 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 CDPF1Q6NVV7 123 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 GGNQ86UU5 652 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 TSEN2Q8NCE0 465 aaKnown RBP7.27□□□□□ -1.25
NIPBL-206ENST00000509429 CHMP7Q8WUX9 453 aaPredicted RBP7.27□□□□□ -1.25
NIPBL-206ENST00000509429 WNT8BQ93098 351 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 KLK14Q9P0G3 267 aa7.27□□□□□ -1.25
NIPBL-206ENST00000509429 FOXD2O60548 495 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-206ENST00000509429 TIAF1O95411 115 aa7.26□□□□□ -1.25
NIPBL-206ENST00000509429 KRT1P04264 644 aa7.26□□□□□ -1.25
NIPBL-206ENST00000509429 CD8BP10966 210 aa7.26□□□□□ -1.25
NIPBL-206ENST00000509429 ADAMTSL4Q6UY14 1074 aa7.26□□□□□ -1.25
NIPBL-206ENST00000509429 SMG8Q8ND04 991 aaKnown RBP7.26□□□□□ -1.25
NIPBL-206ENST00000509429 OSGEPQ9NPF4 335 aa7.26□□□□□ -1.25
NIPBL-206ENST00000509429 SH2B1Q9NRF2 756 aaPredicted RBP7.26□□□□□ -1.25
NIPBL-206ENST00000509429 NFIBO00712 420 aa7.25□□□□□ -1.25
NIPBL-206ENST00000509429 PIP4K2BP78356 416 aa7.25□□□□□ -1.25
NIPBL-206ENST00000509429 KCNMB1Q16558 191 aa7.25□□□□□ -1.25
NIPBL-206ENST00000509429 ZNF765Q7L2R6 523 aa7.25□□□□□ -1.25
NIPBL-206ENST00000509429 SCG3Q8WXD2 468 aaKnown RBP7.25□□□□□ -1.25
NIPBL-206ENST00000509429 EZH1Q92800 747 aaPredicted RBP7.25□□□□□ -1.25
NIPBL-206ENST00000509429 SUGCTQ9HAC7 445 aa7.25□□□□□ -1.25
NIPBL-206ENST00000509429 OPLAHO14841 1288 aa7.24□□□□□ -1.25
NIPBL-206ENST00000509429 ATP1A2P50993 1020 aa7.24□□□□□ -1.25
NIPBL-206ENST00000509429 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
NIPBL-206ENST00000509429 FLAD1Q8NFF5 587 aa7.24□□□□□ -1.25
NIPBL-206ENST00000509429 SPACA7Q96KW9 195 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms