RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 CTNNA3Q9UI47 895 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 LAMB4A4D0S4 1761 aa12.92□□□□□ -0.34
SEC31A-228ENST00000509142 ANKRD18BA2A2Z9 1011 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 APOBRQ0VD83 1088 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 HLFQ16534 295 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 CAMK4Q16566 473 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEC31A-228ENST00000509142 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 E7EWF7 191 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 ZFYP08048 801 aaPredicted RBP12.91□□□□□ -0.34
SEC31A-228ENST00000509142 ITGA6P23229 1130 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 BICD2Q8TD16 824 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 PYCARDQ9ULZ3 195 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
SEC31A-228ENST00000509142 HAND2P61296 217 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
SEC31A-228ENST00000509142 ZAP70P43403 619 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 SCRN1Q12765 414 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
SEC31A-228ENST00000509142 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 TICAM2Q86XR7 235 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 OSBP2Q969R2 916 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 TNS2Q63HR2 1409 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 M0R2C6 588 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
SEC31A-228ENST00000509142 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.9□□□□□ -0.346e-8■■■□□ 14.8
SEC31A-228ENST00000509142 MRVI1Q9Y6F6 885 aa12.9□□□□□ -0.34
SEC31A-228ENST00000509142 CCDC192P0DO97 292 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
SEC31A-228ENST00000509142 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 ZMYND15Q9H091 742 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 GREM2Q9H772 168 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 PPFIA3O75145 1194 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 SPTLC3Q9NUV7 552 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 PFKFB2O60825 505 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 CSF1RP07333 972 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 HMGN5P82970 282 aaKnown RBP12.89□□□□□ -0.35
SEC31A-228ENST00000509142 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
SEC31A-228ENST00000509142 PGBD1Q96JS3 809 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 PLA2G12BQ9BX93 195 aa12.89□□□□□ -0.35
SEC31A-228ENST00000509142 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 RALYLQ86SE5 291 aaKnown RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 TTLL11Q8NHH1 800 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 DYNC1I1O14576 645 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 APPP05067 770 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 CYP19A1P11511 503 aaPredicted RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 CTSWP56202 376 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 CKAP2LQ8IYA6 745 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 TNMDQ9H2S6 317 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 ZSCAN16Q9H4T2 348 aaPredicted RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 XIRP1Q702N8 1843 aaKnown RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 SCARF1Q14162 830 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 ELP1O95163 1332 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 GLI3P10071 1580 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
SEC31A-228ENST00000509142 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 APPBP2Q92624 585 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 ARID3AQ99856 593 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
SEC31A-228ENST00000509142 KDM4FA0A1W2PPD8 638 aa12.87□□□□□ -0.35
SEC31A-228ENST00000509142 KIAA1524Q8TCG1 905 aa12.87□□□□□ -0.35
SEC31A-228ENST00000509142 ZNF213O14771 459 aa12.87□□□□□ -0.35
SEC31A-228ENST00000509142 NR1I2O75469 434 aa12.87□□□□□ -0.35
SEC31A-228ENST00000509142 GUCY1B3Q02153 619 aa12.87□□□□□ -0.35
SEC31A-228ENST00000509142 TRDNQ13061 729 aa12.87□□□□□ -0.35
SEC31A-228ENST00000509142 PDE8AO60658 829 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 ADAMTS2O95450 1211 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 EXOSC10Q01780 885 aaKnown RBP12.86□□□□□ -0.35
SEC31A-228ENST00000509142 NSUN7Q8NE18 718 aaKnown RBP12.86□□□□□ -0.35
SEC31A-228ENST00000509142 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 FGAP02671 866 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 TYRO3Q06418 890 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 SLC9C2Q5TAH2 1124 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 RIPOR2Q9Y4F9 1068 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 CPLX1O14810 134 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 GPAA1O43292 621 aa12.86□□□□□ -0.35
SEC31A-228ENST00000509142 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
SEC31A-228ENST00000509142 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
SEC31A-228ENST00000509142 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
SEC31A-228ENST00000509142 RESTQ13127 1097 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 FTOQ9C0B1 505 aaKnown RBP eCLIP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms